Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chaf1bQ9D0N7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chaf1bQ9D0N7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.71■■□□□ 1.07
Chaf1bQ9D0N7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chaf1bQ9D0N7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chaf1bQ9D0N7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Chaf1bQ9D0N7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chaf1bQ9D0N7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chaf1bQ9D0N7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chaf1bQ9D0N7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chaf1bQ9D0N7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Chaf1bQ9D0N7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chaf1bQ9D0N7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.69■■□□□ 1.06
Chaf1bQ9D0N7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.69■■□□□ 1.06
Chaf1bQ9D0N7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chaf1bQ9D0N7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Chaf1bQ9D0N7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chaf1bQ9D0N7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chaf1bQ9D0N7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chaf1bQ9D0N7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Chaf1bQ9D0N7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chaf1bQ9D0N7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chaf1bQ9D0N7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Chaf1bQ9D0N7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chaf1bQ9D0N7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chaf1bQ9D0N7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chaf1bQ9D0N7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chaf1bQ9D0N7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chaf1bQ9D0N7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Chaf1bQ9D0N7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Chaf1bQ9D0N7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Chaf1bQ9D0N7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chaf1bQ9D0N7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.64■■□□□ 1.06
Chaf1bQ9D0N7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chaf1bQ9D0N7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
Chaf1bQ9D0N7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chaf1bQ9D0N7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chaf1bQ9D0N7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chaf1bQ9D0N7 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.63■■□□□ 1.05
Chaf1bQ9D0N7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Chaf1bQ9D0N7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chaf1bQ9D0N7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chaf1bQ9D0N7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.62■■□□□ 1.05
Chaf1bQ9D0N7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chaf1bQ9D0N7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chaf1bQ9D0N7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chaf1bQ9D0N7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chaf1bQ9D0N7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chaf1bQ9D0N7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chaf1bQ9D0N7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chaf1bQ9D0N7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
Chaf1bQ9D0N7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Chaf1bQ9D0N7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chaf1bQ9D0N7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Chaf1bQ9D0N7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chaf1bQ9D0N7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Chaf1bQ9D0N7 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.58■■□□□ 1.05
Chaf1bQ9D0N7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Chaf1bQ9D0N7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chaf1bQ9D0N7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chaf1bQ9D0N7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Chaf1bQ9D0N7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chaf1bQ9D0N7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Chaf1bQ9D0N7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chaf1bQ9D0N7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chaf1bQ9D0N7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.56■■□□□ 1.04
Chaf1bQ9D0N7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.56■■□□□ 1.04
Chaf1bQ9D0N7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chaf1bQ9D0N7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Chaf1bQ9D0N7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chaf1bQ9D0N7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chaf1bQ9D0N7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chaf1bQ9D0N7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.55■■□□□ 1.04
Chaf1bQ9D0N7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chaf1bQ9D0N7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Chaf1bQ9D0N7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.54■■□□□ 1.04
Chaf1bQ9D0N7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.54■■□□□ 1.04
Chaf1bQ9D0N7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chaf1bQ9D0N7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chaf1bQ9D0N7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.53■■□□□ 1.04
Chaf1bQ9D0N7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chaf1bQ9D0N7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Chaf1bQ9D0N7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chaf1bQ9D0N7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chaf1bQ9D0N7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chaf1bQ9D0N7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chaf1bQ9D0N7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chaf1bQ9D0N7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.51■■□□□ 1.03
Chaf1bQ9D0N7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.51■■□□□ 1.03
Chaf1bQ9D0N7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chaf1bQ9D0N7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chaf1bQ9D0N7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Chaf1bQ9D0N7 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.51■■□□□ 1.03
Chaf1bQ9D0N7 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.51■■□□□ 1.03
Chaf1bQ9D0N7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chaf1bQ9D0N7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chaf1bQ9D0N7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chaf1bQ9D0N7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chaf1bQ9D0N7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Chaf1bQ9D0N7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms