Protein–RNA interactions for Protein: Q9CZG9

Pdzd11, PDZ domain-containing protein 11, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd11Q9CZG9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pdzd11Q9CZG9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdzd11Q9CZG9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdzd11Q9CZG9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pdzd11Q9CZG9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pdzd11Q9CZG9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdzd11Q9CZG9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdzd11Q9CZG9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pdzd11Q9CZG9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Pdzd11Q9CZG9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.27■□□□□ 0.51
Pdzd11Q9CZG9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pdzd11Q9CZG9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Pdzd11Q9CZG9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdzd11Q9CZG9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdzd11Q9CZG9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pdzd11Q9CZG9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pdzd11Q9CZG9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdzd11Q9CZG9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Pdzd11Q9CZG9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.25■□□□□ 0.51
Pdzd11Q9CZG9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdzd11Q9CZG9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdzd11Q9CZG9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdzd11Q9CZG9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdzd11Q9CZG9 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.24■□□□□ 0.51
Pdzd11Q9CZG9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pdzd11Q9CZG9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pdzd11Q9CZG9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pdzd11Q9CZG9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdzd11Q9CZG9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdzd11Q9CZG9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdzd11Q9CZG9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pdzd11Q9CZG9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdzd11Q9CZG9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdzd11Q9CZG9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pdzd11Q9CZG9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pdzd11Q9CZG9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdzd11Q9CZG9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pdzd11Q9CZG9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdzd11Q9CZG9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pdzd11Q9CZG9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pdzd11Q9CZG9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdzd11Q9CZG9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdzd11Q9CZG9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdzd11Q9CZG9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdzd11Q9CZG9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdzd11Q9CZG9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdzd11Q9CZG9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdzd11Q9CZG9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd11Q9CZG9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd11Q9CZG9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd11Q9CZG9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.16■□□□□ 0.5
Pdzd11Q9CZG9 Mipep-204ENSMUST00000225043 1548 ntBASIC18.16■□□□□ 0.5
Pdzd11Q9CZG9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd11Q9CZG9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd11Q9CZG9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd11Q9CZG9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pdzd11Q9CZG9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd11Q9CZG9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Pdzd11Q9CZG9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdzd11Q9CZG9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdzd11Q9CZG9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.15■□□□□ 0.5
Pdzd11Q9CZG9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdzd11Q9CZG9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pdzd11Q9CZG9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pdzd11Q9CZG9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdzd11Q9CZG9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdzd11Q9CZG9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pdzd11Q9CZG9 Notumos-201ENSMUST00000151998 2659 ntBASIC18.13■□□□□ 0.49
Pdzd11Q9CZG9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdzd11Q9CZG9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdzd11Q9CZG9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pdzd11Q9CZG9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdzd11Q9CZG9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pdzd11Q9CZG9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pdzd11Q9CZG9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdzd11Q9CZG9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdzd11Q9CZG9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdzd11Q9CZG9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdzd11Q9CZG9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.12■□□□□ 0.49
Pdzd11Q9CZG9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.12■□□□□ 0.49
Pdzd11Q9CZG9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pdzd11Q9CZG9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdzd11Q9CZG9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pdzd11Q9CZG9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdzd11Q9CZG9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pdzd11Q9CZG9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pdzd11Q9CZG9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pdzd11Q9CZG9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pdzd11Q9CZG9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pdzd11Q9CZG9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdzd11Q9CZG9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdzd11Q9CZG9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Pdzd11Q9CZG9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdzd11Q9CZG9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdzd11Q9CZG9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdzd11Q9CZG9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pdzd11Q9CZG9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdzd11Q9CZG9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pdzd11Q9CZG9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pdzd11Q9CZG9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms