Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Lrrc40Q9CRC8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Lrrc40Q9CRC8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.11■■□□□ 1.29
Lrrc40Q9CRC8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lrrc40Q9CRC8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Lrrc40Q9CRC8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lrrc40Q9CRC8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lrrc40Q9CRC8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Lrrc40Q9CRC8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.1■■□□□ 1.29
Lrrc40Q9CRC8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.1■■□□□ 1.29
Lrrc40Q9CRC8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lrrc40Q9CRC8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Lrrc40Q9CRC8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.09■■□□□ 1.29
Lrrc40Q9CRC8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Lrrc40Q9CRC8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Lrrc40Q9CRC8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Lrrc40Q9CRC8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Lrrc40Q9CRC8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lrrc40Q9CRC8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lrrc40Q9CRC8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lrrc40Q9CRC8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Lrrc40Q9CRC8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lrrc40Q9CRC8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.07■■□□□ 1.28
Lrrc40Q9CRC8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Lrrc40Q9CRC8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lrrc40Q9CRC8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Lrrc40Q9CRC8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Lrrc40Q9CRC8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Lrrc40Q9CRC8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lrrc40Q9CRC8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lrrc40Q9CRC8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lrrc40Q9CRC8 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.03■■□□□ 1.28
Lrrc40Q9CRC8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.03■■□□□ 1.28
Lrrc40Q9CRC8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lrrc40Q9CRC8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Lrrc40Q9CRC8 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.02■■□□□ 1.28
Lrrc40Q9CRC8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
Lrrc40Q9CRC8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lrrc40Q9CRC8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Lrrc40Q9CRC8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Lrrc40Q9CRC8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lrrc40Q9CRC8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Lrrc40Q9CRC8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23■■□□□ 1.27
Lrrc40Q9CRC8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23■■□□□ 1.27
Lrrc40Q9CRC8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23■■□□□ 1.27
Lrrc40Q9CRC8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Lrrc40Q9CRC8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Lrrc40Q9CRC8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23■■□□□ 1.27
Lrrc40Q9CRC8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Lrrc40Q9CRC8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.99■■□□□ 1.27
Lrrc40Q9CRC8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Lrrc40Q9CRC8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.99■■□□□ 1.27
Lrrc40Q9CRC8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.98■■□□□ 1.27
Lrrc40Q9CRC8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lrrc40Q9CRC8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lrrc40Q9CRC8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Lrrc40Q9CRC8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Lrrc40Q9CRC8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Lrrc40Q9CRC8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.96■■□□□ 1.27
Lrrc40Q9CRC8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Lrrc40Q9CRC8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Lrrc40Q9CRC8 Gm6821-201ENSMUST00000107540 542 ntBASIC22.95■■□□□ 1.26
Lrrc40Q9CRC8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Lrrc40Q9CRC8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.94■■□□□ 1.26
Lrrc40Q9CRC8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.94■■□□□ 1.26
Lrrc40Q9CRC8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Lrrc40Q9CRC8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lrrc40Q9CRC8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lrrc40Q9CRC8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lrrc40Q9CRC8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lrrc40Q9CRC8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lrrc40Q9CRC8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lrrc40Q9CRC8 Gm37136-201ENSMUST00000194368 194 ntBASIC22.91■■□□□ 1.26
Lrrc40Q9CRC8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Lrrc40Q9CRC8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lrrc40Q9CRC8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lrrc40Q9CRC8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Lrrc40Q9CRC8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Lrrc40Q9CRC8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
Lrrc40Q9CRC8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Lrrc40Q9CRC8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Lrrc40Q9CRC8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Lrrc40Q9CRC8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Lrrc40Q9CRC8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Lrrc40Q9CRC8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Lrrc40Q9CRC8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Lrrc40Q9CRC8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lrrc40Q9CRC8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lrrc40Q9CRC8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lrrc40Q9CRC8 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.86■■□□□ 1.25
Lrrc40Q9CRC8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.86■■□□□ 1.25
Lrrc40Q9CRC8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Lrrc40Q9CRC8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Lrrc40Q9CRC8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lrrc40Q9CRC8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lrrc40Q9CRC8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Lrrc40Q9CRC8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lrrc40Q9CRC8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Lrrc40Q9CRC8 Gm8503-201ENSMUST00000118131 455 ntBASIC22.83■■□□□ 1.25
Lrrc40Q9CRC8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms