Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61bQ9CQS8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61bQ9CQS8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61bQ9CQS8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61bQ9CQS8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61bQ9CQS8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC12.49□□□□□ -0.41
Sec61bQ9CQS8 Gm37136-201ENSMUST00000194368 194 ntBASIC12.49□□□□□ -0.41
Sec61bQ9CQS8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61bQ9CQS8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61bQ9CQS8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC12.48□□□□□ -0.41
Sec61bQ9CQS8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61bQ9CQS8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61bQ9CQS8 Gm16437-201ENSMUST00000025669 507 ntBASIC12.48□□□□□ -0.41
Sec61bQ9CQS8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC12.48□□□□□ -0.41
Sec61bQ9CQS8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61bQ9CQS8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61bQ9CQS8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61bQ9CQS8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61bQ9CQS8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC12.46□□□□□ -0.41
Sec61bQ9CQS8 Gm13889-201ENSMUST00000099689 1386 ntBASIC12.46□□□□□ -0.41
Sec61bQ9CQS8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61bQ9CQS8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61bQ9CQS8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61bQ9CQS8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61bQ9CQS8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61bQ9CQS8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC12.46□□□□□ -0.42
Sec61bQ9CQS8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61bQ9CQS8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61bQ9CQS8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61bQ9CQS8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61bQ9CQS8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC12.45□□□□□ -0.42
Sec61bQ9CQS8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC12.45□□□□□ -0.42
Sec61bQ9CQS8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61bQ9CQS8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61bQ9CQS8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61bQ9CQS8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61bQ9CQS8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sec61bQ9CQS8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61bQ9CQS8 Gm12818-201ENSMUST00000117562 1349 ntBASIC12.43□□□□□ -0.42
Sec61bQ9CQS8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC12.43□□□□□ -0.42
Sec61bQ9CQS8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61bQ9CQS8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC12.43□□□□□ -0.42
Sec61bQ9CQS8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61bQ9CQS8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61bQ9CQS8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61bQ9CQS8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61bQ9CQS8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61bQ9CQS8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sec61bQ9CQS8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC12.42□□□□□ -0.42
Sec61bQ9CQS8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61bQ9CQS8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61bQ9CQS8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61bQ9CQS8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61bQ9CQS8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC12.41□□□□□ -0.42
Sec61bQ9CQS8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61bQ9CQS8 Gm45364-201ENSMUST00000210883 159 ntBASIC12.41□□□□□ -0.42
Sec61bQ9CQS8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61bQ9CQS8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61bQ9CQS8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61bQ9CQS8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61bQ9CQS8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC12.4□□□□□ -0.42
Sec61bQ9CQS8 Gm12366-201ENSMUST00000121722 873 ntBASIC12.4□□□□□ -0.42
Sec61bQ9CQS8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC12.4□□□□□ -0.42
Sec61bQ9CQS8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC12.4□□□□□ -0.42
Sec61bQ9CQS8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC12.4□□□□□ -0.42
Sec61bQ9CQS8 Gm5786-201ENSMUST00000085368 882 ntBASIC12.4□□□□□ -0.42
Sec61bQ9CQS8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61bQ9CQS8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sec61bQ9CQS8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sec61bQ9CQS8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sec61bQ9CQS8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sec61bQ9CQS8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12.39□□□□□ -0.43
Sec61bQ9CQS8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sec61bQ9CQS8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61bQ9CQS8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Sec61bQ9CQS8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61bQ9CQS8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sec61bQ9CQS8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61bQ9CQS8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC12.38□□□□□ -0.43
Sec61bQ9CQS8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC12.38□□□□□ -0.43
Sec61bQ9CQS8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61bQ9CQS8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61bQ9CQS8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61bQ9CQS8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61bQ9CQS8 Gm7332-201ENSMUST00000118351 454 ntBASIC12.37□□□□□ -0.43
Sec61bQ9CQS8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61bQ9CQS8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Sec61bQ9CQS8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61bQ9CQS8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sec61bQ9CQS8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sec61bQ9CQS8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Sec61bQ9CQS8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Sec61bQ9CQS8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61bQ9CQS8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61bQ9CQS8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61bQ9CQS8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC12.36□□□□□ -0.43
Sec61bQ9CQS8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61bQ9CQS8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms