Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim11Q99PQ2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Trim11Q99PQ2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim11Q99PQ2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim11Q99PQ2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim11Q99PQ2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.48■■□□□ 1.83
Trim11Q99PQ2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim11Q99PQ2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim11Q99PQ2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.46■■□□□ 1.83
Trim11Q99PQ2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.46■■□□□ 1.83
Trim11Q99PQ2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.46■■□□□ 1.83
Trim11Q99PQ2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Trim11Q99PQ2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.45■■□□□ 1.82
Trim11Q99PQ2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim11Q99PQ2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Trim11Q99PQ2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim11Q99PQ2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim11Q99PQ2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.44■■□□□ 1.82
Trim11Q99PQ2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Trim11Q99PQ2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim11Q99PQ2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim11Q99PQ2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Trim11Q99PQ2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trim11Q99PQ2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trim11Q99PQ2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trim11Q99PQ2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.4■■□□□ 1.82
Trim11Q99PQ2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.4■■□□□ 1.82
Trim11Q99PQ2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.39■■□□□ 1.82
Trim11Q99PQ2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim11Q99PQ2 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.39■■□□□ 1.82
Trim11Q99PQ2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Trim11Q99PQ2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Trim11Q99PQ2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Trim11Q99PQ2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trim11Q99PQ2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Trim11Q99PQ2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Trim11Q99PQ2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim11Q99PQ2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim11Q99PQ2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Trim11Q99PQ2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Trim11Q99PQ2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Trim11Q99PQ2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Trim11Q99PQ2 Gm14121-201ENSMUST00000121441 1380 ntBASIC26.33■■□□□ 1.81
Trim11Q99PQ2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim11Q99PQ2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.33■■□□□ 1.81
Trim11Q99PQ2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Trim11Q99PQ2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Trim11Q99PQ2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim11Q99PQ2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.32■■□□□ 1.8
Trim11Q99PQ2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim11Q99PQ2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Trim11Q99PQ2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.32■■□□□ 1.8
Trim11Q99PQ2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Trim11Q99PQ2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim11Q99PQ2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim11Q99PQ2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Trim11Q99PQ2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.31■■□□□ 1.8
Trim11Q99PQ2 Gm6821-201ENSMUST00000107540 542 ntBASIC26.3■■□□□ 1.8
Trim11Q99PQ2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.3■■□□□ 1.8
Trim11Q99PQ2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim11Q99PQ2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim11Q99PQ2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.27■■□□□ 1.8
Trim11Q99PQ2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim11Q99PQ2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim11Q99PQ2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trim11Q99PQ2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Trim11Q99PQ2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.25■■□□□ 1.79
Trim11Q99PQ2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim11Q99PQ2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Trim11Q99PQ2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim11Q99PQ2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim11Q99PQ2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Trim11Q99PQ2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trim11Q99PQ2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trim11Q99PQ2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trim11Q99PQ2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim11Q99PQ2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim11Q99PQ2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim11Q99PQ2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim11Q99PQ2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim11Q99PQ2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Trim11Q99PQ2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
Trim11Q99PQ2 Gm37136-201ENSMUST00000194368 194 ntBASIC26.2■■□□□ 1.78
Trim11Q99PQ2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Trim11Q99PQ2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Trim11Q99PQ2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim11Q99PQ2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim11Q99PQ2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim11Q99PQ2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim11Q99PQ2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim11Q99PQ2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim11Q99PQ2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.17■■□□□ 1.78
Trim11Q99PQ2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim11Q99PQ2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim11Q99PQ2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trim11Q99PQ2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim11Q99PQ2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trim11Q99PQ2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Trim11Q99PQ2 Gm8503-201ENSMUST00000118131 455 ntBASIC26.15■■□□□ 1.78
Trim11Q99PQ2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms