Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Cdh23Q99PF4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Cdh23Q99PF4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.69■■□□□ 1.54
Cdh23Q99PF4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Cdh23Q99PF4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.68■■□□□ 1.54
Cdh23Q99PF4 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.68■■□□□ 1.54
Cdh23Q99PF4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cdh23Q99PF4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Cdh23Q99PF4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
Cdh23Q99PF4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Cdh23Q99PF4 Mir3960-201ENSMUST00000198213 73 ntBASIC24.66■■□□□ 1.54
Cdh23Q99PF4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cdh23Q99PF4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cdh23Q99PF4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Cdh23Q99PF4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cdh23Q99PF4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
Cdh23Q99PF4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Cdh23Q99PF4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.64■■□□□ 1.54
Cdh23Q99PF4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Cdh23Q99PF4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cdh23Q99PF4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cdh23Q99PF4 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.63■■□□□ 1.53
Cdh23Q99PF4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.63■■□□□ 1.53
Cdh23Q99PF4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cdh23Q99PF4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.62■■□□□ 1.53
Cdh23Q99PF4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.62■■□□□ 1.53
Cdh23Q99PF4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.61■■□□□ 1.53
Cdh23Q99PF4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC24.61■■□□□ 1.53
Cdh23Q99PF4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cdh23Q99PF4 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.59■■□□□ 1.53
Cdh23Q99PF4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cdh23Q99PF4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cdh23Q99PF4 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.58■■□□□ 1.53
Cdh23Q99PF4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Cdh23Q99PF4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Cdh23Q99PF4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.56■■□□□ 1.52
Cdh23Q99PF4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cdh23Q99PF4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Cdh23Q99PF4 Rps24-207ENSMUST00000224568 714 ntBASIC24.55■■□□□ 1.52
Cdh23Q99PF4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cdh23Q99PF4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cdh23Q99PF4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.54■■□□□ 1.52
Cdh23Q99PF4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cdh23Q99PF4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Cdh23Q99PF4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cdh23Q99PF4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Cdh23Q99PF4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.52■■□□□ 1.52
Cdh23Q99PF4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cdh23Q99PF4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cdh23Q99PF4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cdh23Q99PF4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.5■■□□□ 1.51
Cdh23Q99PF4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cdh23Q99PF4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cdh23Q99PF4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.5■■□□□ 1.51
Cdh23Q99PF4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.5■■□□□ 1.51
Cdh23Q99PF4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cdh23Q99PF4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cdh23Q99PF4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Cdh23Q99PF4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.48■■□□□ 1.51
Cdh23Q99PF4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cdh23Q99PF4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
Cdh23Q99PF4 Gm15820-201ENSMUST00000201566 728 ntBASIC24.48■■□□□ 1.51
Cdh23Q99PF4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cdh23Q99PF4 Gm45102-201ENSMUST00000207427 857 ntBASIC24.47■■□□□ 1.51
Cdh23Q99PF4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cdh23Q99PF4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cdh23Q99PF4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Cdh23Q99PF4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cdh23Q99PF4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Cdh23Q99PF4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cdh23Q99PF4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cdh23Q99PF4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Cdh23Q99PF4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Cdh23Q99PF4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.45■■□□□ 1.5
Cdh23Q99PF4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cdh23Q99PF4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cdh23Q99PF4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cdh23Q99PF4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cdh23Q99PF4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cdh23Q99PF4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cdh23Q99PF4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC24.43■■□□□ 1.5
Cdh23Q99PF4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cdh23Q99PF4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cdh23Q99PF4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Cdh23Q99PF4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.43■■□□□ 1.5
Cdh23Q99PF4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Cdh23Q99PF4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cdh23Q99PF4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cdh23Q99PF4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
Cdh23Q99PF4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Cdh23Q99PF4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cdh23Q99PF4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cdh23Q99PF4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cdh23Q99PF4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cdh23Q99PF4 Gm14117-201ENSMUST00000122417 843 ntBASIC24.4■■□□□ 1.5
Cdh23Q99PF4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cdh23Q99PF4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cdh23Q99PF4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cdh23Q99PF4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.39■■□□□ 1.49
Cdh23Q99PF4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms