Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.42■■□□□ 1.02
Cdca3Q99M54 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Cdca3Q99M54 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdca3Q99M54 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.41■■□□□ 1.02
Cdca3Q99M54 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdca3Q99M54 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdca3Q99M54 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdca3Q99M54 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdca3Q99M54 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdca3Q99M54 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.4■■□□□ 1.02
Cdca3Q99M54 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdca3Q99M54 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Cdca3Q99M54 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Cdca3Q99M54 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Cdca3Q99M54 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.38■■□□□ 1.01
Cdca3Q99M54 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdca3Q99M54 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Cdca3Q99M54 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdca3Q99M54 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.36■■□□□ 1.01
Cdca3Q99M54 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cdca3Q99M54 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdca3Q99M54 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdca3Q99M54 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdca3Q99M54 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdca3Q99M54 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Cdca3Q99M54 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdca3Q99M54 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.34■■□□□ 1.01
Cdca3Q99M54 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdca3Q99M54 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdca3Q99M54 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdca3Q99M54 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdca3Q99M54 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdca3Q99M54 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Cdca3Q99M54 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cdca3Q99M54 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Cdca3Q99M54 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cdca3Q99M54 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cdca3Q99M54 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cdca3Q99M54 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Cdca3Q99M54 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdca3Q99M54 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdca3Q99M54 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdca3Q99M54 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cdca3Q99M54 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Cdca3Q99M54 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cdca3Q99M54 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Cdca3Q99M54 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdca3Q99M54 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.29■■□□□ 1
Cdca3Q99M54 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cdca3Q99M54 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdca3Q99M54 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.28■■□□□ 1
Cdca3Q99M54 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdca3Q99M54 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdca3Q99M54 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.27■■□□□ 1
Cdca3Q99M54 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdca3Q99M54 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.26■□□□□ 0.99
Cdca3Q99M54 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.26■□□□□ 0.99
Cdca3Q99M54 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Cdca3Q99M54 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdca3Q99M54 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.26■□□□□ 0.99
Cdca3Q99M54 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdca3Q99M54 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdca3Q99M54 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cdca3Q99M54 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.24■□□□□ 0.99
Cdca3Q99M54 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdca3Q99M54 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.23■□□□□ 0.99
Cdca3Q99M54 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdca3Q99M54 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cdca3Q99M54 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Cdca3Q99M54 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdca3Q99M54 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdca3Q99M54 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdca3Q99M54 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdca3Q99M54 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdca3Q99M54 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.2■□□□□ 0.98
Cdca3Q99M54 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.2■□□□□ 0.98
Cdca3Q99M54 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.2■□□□□ 0.98
Cdca3Q99M54 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdca3Q99M54 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.2■□□□□ 0.98
Cdca3Q99M54 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdca3Q99M54 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdca3Q99M54 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdca3Q99M54 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdca3Q99M54 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdca3Q99M54 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdca3Q99M54 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdca3Q99M54 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdca3Q99M54 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cdca3Q99M54 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdca3Q99M54 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdca3Q99M54 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdca3Q99M54 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdca3Q99M54 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdca3Q99M54 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdca3Q99M54 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.16■□□□□ 0.98
Cdca3Q99M54 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdca3Q99M54 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdca3Q99M54 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdca3Q99M54 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdca3Q99M54 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms