Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp1aQ921W0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.39■□□□□ 0.85
Chmp1aQ921W0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp1aQ921W0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp1aQ921W0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Chmp1aQ921W0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp1aQ921W0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp1aQ921W0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Chmp1aQ921W0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp1aQ921W0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp1aQ921W0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.36■□□□□ 0.85
Chmp1aQ921W0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp1aQ921W0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp1aQ921W0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Chmp1aQ921W0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp1aQ921W0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp1aQ921W0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp1aQ921W0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp1aQ921W0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Chmp1aQ921W0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.33■□□□□ 0.84
Chmp1aQ921W0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp1aQ921W0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp1aQ921W0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp1aQ921W0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp1aQ921W0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp1aQ921W0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp1aQ921W0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp1aQ921W0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp1aQ921W0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp1aQ921W0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp1aQ921W0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp1aQ921W0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp1aQ921W0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp1aQ921W0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp1aQ921W0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chmp1aQ921W0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp1aQ921W0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Chmp1aQ921W0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp1aQ921W0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp1aQ921W0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp1aQ921W0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
Chmp1aQ921W0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp1aQ921W0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp1aQ921W0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp1aQ921W0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp1aQ921W0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Chmp1aQ921W0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Chmp1aQ921W0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp1aQ921W0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp1aQ921W0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp1aQ921W0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp1aQ921W0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chmp1aQ921W0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp1aQ921W0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Chmp1aQ921W0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp1aQ921W0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp1aQ921W0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp1aQ921W0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Chmp1aQ921W0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Chmp1aQ921W0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Chmp1aQ921W0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
Chmp1aQ921W0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp1aQ921W0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Chmp1aQ921W0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp1aQ921W0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp1aQ921W0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp1aQ921W0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp1aQ921W0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp1aQ921W0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp1aQ921W0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Chmp1aQ921W0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp1aQ921W0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp1aQ921W0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.21■□□□□ 0.83
Chmp1aQ921W0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp1aQ921W0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Chmp1aQ921W0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp1aQ921W0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.2■□□□□ 0.82
Chmp1aQ921W0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp1aQ921W0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Chmp1aQ921W0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp1aQ921W0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp1aQ921W0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.19■□□□□ 0.82
Chmp1aQ921W0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.19■□□□□ 0.82
Chmp1aQ921W0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.19■□□□□ 0.82
Chmp1aQ921W0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp1aQ921W0 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.18■□□□□ 0.82
Chmp1aQ921W0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.18■□□□□ 0.82
Chmp1aQ921W0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp1aQ921W0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp1aQ921W0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp1aQ921W0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp1aQ921W0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Chmp1aQ921W0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp1aQ921W0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp1aQ921W0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp1aQ921W0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp1aQ921W0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp1aQ921W0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp1aQ921W0 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.15■□□□□ 0.82
Chmp1aQ921W0 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms