Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb2Q91Y00 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.64■■□□□ 1.54
Pcdhb2Q91Y00 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdhb2Q91Y00 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb2Q91Y00 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.63■■□□□ 1.53
Pcdhb2Q91Y00 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb2Q91Y00 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.62■■□□□ 1.53
Pcdhb2Q91Y00 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb2Q91Y00 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb2Q91Y00 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Pcdhb2Q91Y00 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb2Q91Y00 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb2Q91Y00 Gm6311-201ENSMUST00000073790 878 ntBASIC24.59■■□□□ 1.53
Pcdhb2Q91Y00 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb2Q91Y00 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Pcdhb2Q91Y00 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Pcdhb2Q91Y00 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb2Q91Y00 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb2Q91Y00 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb2Q91Y00 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb2Q91Y00 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb2Q91Y00 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
Pcdhb2Q91Y00 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Pcdhb2Q91Y00 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb2Q91Y00 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Pcdhb2Q91Y00 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Pcdhb2Q91Y00 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb2Q91Y00 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb2Q91Y00 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhb2Q91Y00 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.54■■□□□ 1.52
Pcdhb2Q91Y00 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb2Q91Y00 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.52■■□□□ 1.52
Pcdhb2Q91Y00 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb2Q91Y00 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb2Q91Y00 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb2Q91Y00 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb2Q91Y00 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb2Q91Y00 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb2Q91Y00 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb2Q91Y00 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Pcdhb2Q91Y00 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Pcdhb2Q91Y00 Mir3960-201ENSMUST00000198213 73 ntBASIC24.5■■□□□ 1.51
Pcdhb2Q91Y00 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.5■■□□□ 1.51
Pcdhb2Q91Y00 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb2Q91Y00 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.5■■□□□ 1.51
Pcdhb2Q91Y00 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb2Q91Y00 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.49■■□□□ 1.51
Pcdhb2Q91Y00 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb2Q91Y00 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb2Q91Y00 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.48■■□□□ 1.51
Pcdhb2Q91Y00 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.48■■□□□ 1.51
Pcdhb2Q91Y00 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Pcdhb2Q91Y00 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.48■■□□□ 1.51
Pcdhb2Q91Y00 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb2Q91Y00 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Pcdhb2Q91Y00 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb2Q91Y00 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb2Q91Y00 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb2Q91Y00 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.46■■□□□ 1.51
Pcdhb2Q91Y00 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.46■■□□□ 1.51
Pcdhb2Q91Y00 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.46■■□□□ 1.51
Pcdhb2Q91Y00 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb2Q91Y00 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Pcdhb2Q91Y00 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Pcdhb2Q91Y00 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Pcdhb2Q91Y00 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhb2Q91Y00 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhb2Q91Y00 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.44■■□□□ 1.5
Pcdhb2Q91Y00 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb2Q91Y00 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb2Q91Y00 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb2Q91Y00 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.43■■□□□ 1.5
Pcdhb2Q91Y00 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb2Q91Y00 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb2Q91Y00 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb2Q91Y00 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb2Q91Y00 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb2Q91Y00 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb2Q91Y00 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb2Q91Y00 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.4■■□□□ 1.5
Pcdhb2Q91Y00 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb2Q91Y00 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.4■■□□□ 1.5
Pcdhb2Q91Y00 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb2Q91Y00 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Pcdhb2Q91Y00 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb2Q91Y00 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb2Q91Y00 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhb2Q91Y00 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.39■■□□□ 1.49
Pcdhb2Q91Y00 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb2Q91Y00 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb2Q91Y00 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.38■■□□□ 1.49
Pcdhb2Q91Y00 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.37■■□□□ 1.49
Pcdhb2Q91Y00 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb2Q91Y00 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb2Q91Y00 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Pcdhb2Q91Y00 Gm45364-201ENSMUST00000210883 159 ntBASIC24.36■■□□□ 1.49
Pcdhb2Q91Y00 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb2Q91Y00 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb2Q91Y00 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb2Q91Y00 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms