Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhgb1Q91XX8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhgb1Q91XX8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhgb1Q91XX8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhgb1Q91XX8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.19■■□□□ 1.46
Pcdhgb1Q91XX8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhgb1Q91XX8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhgb1Q91XX8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.18■■□□□ 1.46
Pcdhgb1Q91XX8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhgb1Q91XX8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Pcdhgb1Q91XX8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Pcdhgb1Q91XX8 Mir6538-201ENSMUST00000183713 110 ntBASIC24.17■■□□□ 1.46
Pcdhgb1Q91XX8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhgb1Q91XX8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Pcdhgb1Q91XX8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhgb1Q91XX8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhgb1Q91XX8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.14■■□□□ 1.45
Pcdhgb1Q91XX8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhgb1Q91XX8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhgb1Q91XX8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhgb1Q91XX8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhgb1Q91XX8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhgb1Q91XX8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.12■■□□□ 1.45
Pcdhgb1Q91XX8 Mir3960-201ENSMUST00000198213 73 ntBASIC24.12■■□□□ 1.45
Pcdhgb1Q91XX8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhgb1Q91XX8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhgb1Q91XX8 Gm45364-201ENSMUST00000210883 159 ntBASIC24.1■■□□□ 1.45
Pcdhgb1Q91XX8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhgb1Q91XX8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhgb1Q91XX8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhgb1Q91XX8 Scarna2-201ENSMUST00000157560 414 ntBASIC24.09■■□□□ 1.45
Pcdhgb1Q91XX8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhgb1Q91XX8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhgb1Q91XX8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Pcdhgb1Q91XX8 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.08■■□□□ 1.45
Pcdhgb1Q91XX8 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.08■■□□□ 1.45
Pcdhgb1Q91XX8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhgb1Q91XX8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhgb1Q91XX8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdhgb1Q91XX8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.07■■□□□ 1.44
Pcdhgb1Q91XX8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Pcdhgb1Q91XX8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhgb1Q91XX8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhgb1Q91XX8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.05■■□□□ 1.44
Pcdhgb1Q91XX8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.04■■□□□ 1.44
Pcdhgb1Q91XX8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhgb1Q91XX8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhgb1Q91XX8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhgb1Q91XX8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Pcdhgb1Q91XX8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Pcdhgb1Q91XX8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.03■■□□□ 1.44
Pcdhgb1Q91XX8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhgb1Q91XX8 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.03■■□□□ 1.44
Pcdhgb1Q91XX8 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.02■■□□□ 1.44
Pcdhgb1Q91XX8 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.02■■□□□ 1.44
Pcdhgb1Q91XX8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhgb1Q91XX8 Gm16437-201ENSMUST00000025669 507 ntBASIC24.02■■□□□ 1.44
Pcdhgb1Q91XX8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb1Q91XX8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb1Q91XX8 Cap2-205ENSMUST00000225824 1634 ntBASIC24.01■■□□□ 1.43
Pcdhgb1Q91XX8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb1Q91XX8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb1Q91XX8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb1Q91XX8 Gm9806-201ENSMUST00000051080 552 ntBASIC24■■□□□ 1.43
Pcdhgb1Q91XX8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb1Q91XX8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhgb1Q91XX8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhgb1Q91XX8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.99■■□□□ 1.43
Pcdhgb1Q91XX8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhgb1Q91XX8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhgb1Q91XX8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhgb1Q91XX8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhgb1Q91XX8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.98■■□□□ 1.43
Pcdhgb1Q91XX8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhgb1Q91XX8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhgb1Q91XX8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhgb1Q91XX8 Gm11687-201ENSMUST00000118911 886 ntBASIC23.97■■□□□ 1.43
Pcdhgb1Q91XX8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhgb1Q91XX8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.97■■□□□ 1.43
Pcdhgb1Q91XX8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.97■■□□□ 1.43
Pcdhgb1Q91XX8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhgb1Q91XX8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhgb1Q91XX8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhgb1Q91XX8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhgb1Q91XX8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhgb1Q91XX8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhgb1Q91XX8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.94■■□□□ 1.42
Pcdhgb1Q91XX8 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.94■■□□□ 1.42
Pcdhgb1Q91XX8 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.93■■□□□ 1.42
Pcdhgb1Q91XX8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhgb1Q91XX8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhgb1Q91XX8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhgb1Q91XX8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhgb1Q91XX8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.92■■□□□ 1.42
Pcdhgb1Q91XX8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhgb1Q91XX8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.91■■□□□ 1.42
Pcdhgb1Q91XX8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.91■■□□□ 1.42
Pcdhgb1Q91XX8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhgb1Q91XX8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhgb1Q91XX8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms