Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24■■□□□ 1.43
Trim60Q8VI40 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim60Q8VI40 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
Trim60Q8VI40 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim60Q8VI40 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Trim60Q8VI40 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
Trim60Q8VI40 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim60Q8VI40 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Trim60Q8VI40 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Trim60Q8VI40 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim60Q8VI40 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim60Q8VI40 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim60Q8VI40 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim60Q8VI40 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim60Q8VI40 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim60Q8VI40 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim60Q8VI40 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Trim60Q8VI40 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
Trim60Q8VI40 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trim60Q8VI40 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim60Q8VI40 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim60Q8VI40 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim60Q8VI40 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim60Q8VI40 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.93■■□□□ 1.42
Trim60Q8VI40 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim60Q8VI40 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trim60Q8VI40 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trim60Q8VI40 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trim60Q8VI40 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Trim60Q8VI40 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim60Q8VI40 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim60Q8VI40 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim60Q8VI40 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim60Q8VI40 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trim60Q8VI40 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim60Q8VI40 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Trim60Q8VI40 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim60Q8VI40 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Trim60Q8VI40 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim60Q8VI40 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim60Q8VI40 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim60Q8VI40 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim60Q8VI40 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trim60Q8VI40 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Trim60Q8VI40 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trim60Q8VI40 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trim60Q8VI40 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trim60Q8VI40 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Trim60Q8VI40 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim60Q8VI40 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim60Q8VI40 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
Trim60Q8VI40 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim60Q8VI40 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
Trim60Q8VI40 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Trim60Q8VI40 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim60Q8VI40 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim60Q8VI40 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim60Q8VI40 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Trim60Q8VI40 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim60Q8VI40 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim60Q8VI40 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim60Q8VI40 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim60Q8VI40 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim60Q8VI40 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim60Q8VI40 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
Trim60Q8VI40 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim60Q8VI40 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.79■■□□□ 1.4
Trim60Q8VI40 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.79■■□□□ 1.4
Trim60Q8VI40 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Trim60Q8VI40 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim60Q8VI40 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Trim60Q8VI40 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim60Q8VI40 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim60Q8VI40 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim60Q8VI40 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Trim60Q8VI40 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Trim60Q8VI40 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Trim60Q8VI40 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim60Q8VI40 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim60Q8VI40 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim60Q8VI40 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Trim60Q8VI40 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim60Q8VI40 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim60Q8VI40 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim60Q8VI40 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Trim60Q8VI40 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim60Q8VI40 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim60Q8VI40 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Trim60Q8VI40 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.74■■□□□ 1.39
Trim60Q8VI40 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim60Q8VI40 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim60Q8VI40 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim60Q8VI40 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Trim60Q8VI40 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim60Q8VI40 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
Trim60Q8VI40 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.73■■□□□ 1.39
Trim60Q8VI40 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim60Q8VI40 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim60Q8VI40 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
Trim60Q8VI40 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms