Protein–RNA interactions for Protein: Q8R3P8

Rnf113a1, Ring finger protein 113A1, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf113a1Q8R3P8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf113a1Q8R3P8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Rnf113a1Q8R3P8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf113a1Q8R3P8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf113a1Q8R3P8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf113a1Q8R3P8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rnf113a1Q8R3P8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf113a1Q8R3P8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.19■□□□□ 0.82
Rnf113a1Q8R3P8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf113a1Q8R3P8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf113a1Q8R3P8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf113a1Q8R3P8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
Rnf113a1Q8R3P8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf113a1Q8R3P8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf113a1Q8R3P8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf113a1Q8R3P8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.17■□□□□ 0.82
Rnf113a1Q8R3P8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf113a1Q8R3P8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rnf113a1Q8R3P8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf113a1Q8R3P8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf113a1Q8R3P8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf113a1Q8R3P8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf113a1Q8R3P8 Gm30023-201ENSMUST00000197970 889 ntBASIC20.15■□□□□ 0.82
Rnf113a1Q8R3P8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf113a1Q8R3P8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf113a1Q8R3P8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.15■□□□□ 0.82
Rnf113a1Q8R3P8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf113a1Q8R3P8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf113a1Q8R3P8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf113a1Q8R3P8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf113a1Q8R3P8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.13■□□□□ 0.81
Rnf113a1Q8R3P8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rnf113a1Q8R3P8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf113a1Q8R3P8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf113a1Q8R3P8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf113a1Q8R3P8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf113a1Q8R3P8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf113a1Q8R3P8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf113a1Q8R3P8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf113a1Q8R3P8 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.1■□□□□ 0.81
Rnf113a1Q8R3P8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf113a1Q8R3P8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.1■□□□□ 0.81
Rnf113a1Q8R3P8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.09■□□□□ 0.81
Rnf113a1Q8R3P8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.09■□□□□ 0.81
Rnf113a1Q8R3P8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf113a1Q8R3P8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Rnf113a1Q8R3P8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.08■□□□□ 0.81
Rnf113a1Q8R3P8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.08■□□□□ 0.81
Rnf113a1Q8R3P8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf113a1Q8R3P8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Rnf113a1Q8R3P8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.08■□□□□ 0.8
Rnf113a1Q8R3P8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf113a1Q8R3P8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf113a1Q8R3P8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf113a1Q8R3P8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf113a1Q8R3P8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.07■□□□□ 0.8
Rnf113a1Q8R3P8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf113a1Q8R3P8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rnf113a1Q8R3P8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf113a1Q8R3P8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf113a1Q8R3P8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.06■□□□□ 0.8
Rnf113a1Q8R3P8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf113a1Q8R3P8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf113a1Q8R3P8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf113a1Q8R3P8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf113a1Q8R3P8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf113a1Q8R3P8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Rnf113a1Q8R3P8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf113a1Q8R3P8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf113a1Q8R3P8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rnf113a1Q8R3P8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf113a1Q8R3P8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf113a1Q8R3P8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf113a1Q8R3P8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf113a1Q8R3P8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf113a1Q8R3P8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf113a1Q8R3P8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf113a1Q8R3P8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf113a1Q8R3P8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf113a1Q8R3P8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf113a1Q8R3P8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rnf113a1Q8R3P8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf113a1Q8R3P8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf113a1Q8R3P8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf113a1Q8R3P8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf113a1Q8R3P8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf113a1Q8R3P8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rnf113a1Q8R3P8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rnf113a1Q8R3P8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf113a1Q8R3P8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20■□□□□ 0.79
Rnf113a1Q8R3P8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20■□□□□ 0.79
Rnf113a1Q8R3P8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rnf113a1Q8R3P8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf113a1Q8R3P8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf113a1Q8R3P8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20■□□□□ 0.79
Rnf113a1Q8R3P8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf113a1Q8R3P8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf113a1Q8R3P8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf113a1Q8R3P8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf113a1Q8R3P8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms