Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ptcd2Q8R3K3 Gm14117-201ENSMUST00000122417 843 ntBASIC25.4■■□□□ 1.66
Ptcd2Q8R3K3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ptcd2Q8R3K3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ptcd2Q8R3K3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.38■■□□□ 1.65
Ptcd2Q8R3K3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ptcd2Q8R3K3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ptcd2Q8R3K3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ptcd2Q8R3K3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ptcd2Q8R3K3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Ptcd2Q8R3K3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Ptcd2Q8R3K3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptcd2Q8R3K3 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.35■■□□□ 1.65
Ptcd2Q8R3K3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptcd2Q8R3K3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptcd2Q8R3K3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Ptcd2Q8R3K3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.33■■□□□ 1.65
Ptcd2Q8R3K3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptcd2Q8R3K3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25.33■■□□□ 1.65
Ptcd2Q8R3K3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.33■■□□□ 1.65
Ptcd2Q8R3K3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ptcd2Q8R3K3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ptcd2Q8R3K3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Ptcd2Q8R3K3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ptcd2Q8R3K3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptcd2Q8R3K3 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.31■■□□□ 1.64
Ptcd2Q8R3K3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ptcd2Q8R3K3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ptcd2Q8R3K3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.29■■□□□ 1.64
Ptcd2Q8R3K3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Ptcd2Q8R3K3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ptcd2Q8R3K3 Gm37136-201ENSMUST00000194368 194 ntBASIC25.28■■□□□ 1.64
Ptcd2Q8R3K3 Gm43566-201ENSMUST00000196851 808 ntBASIC25.28■■□□□ 1.64
Ptcd2Q8R3K3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ptcd2Q8R3K3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ptcd2Q8R3K3 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.27■■□□□ 1.64
Ptcd2Q8R3K3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ptcd2Q8R3K3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Ptcd2Q8R3K3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Ptcd2Q8R3K3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ptcd2Q8R3K3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.24■■□□□ 1.63
Ptcd2Q8R3K3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Ptcd2Q8R3K3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.24■■□□□ 1.63
Ptcd2Q8R3K3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ptcd2Q8R3K3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Ptcd2Q8R3K3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ptcd2Q8R3K3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.23■■□□□ 1.63
Ptcd2Q8R3K3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.23■■□□□ 1.63
Ptcd2Q8R3K3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
Ptcd2Q8R3K3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ptcd2Q8R3K3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
Ptcd2Q8R3K3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.21■■□□□ 1.63
Ptcd2Q8R3K3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptcd2Q8R3K3 Gm9812-201ENSMUST00000061934 968 ntBASIC25.21■■□□□ 1.63
Ptcd2Q8R3K3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Ptcd2Q8R3K3 Gm45444-201ENSMUST00000211394 898 ntBASIC25.2■■□□□ 1.62
Ptcd2Q8R3K3 Gm9959-201ENSMUST00000068277 390 ntBASIC25.19■■□□□ 1.62
Ptcd2Q8R3K3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ptcd2Q8R3K3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ptcd2Q8R3K3 Gm13238-201ENSMUST00000117655 780 ntBASIC25.18■■□□□ 1.62
Ptcd2Q8R3K3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ptcd2Q8R3K3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.18■■□□□ 1.62
Ptcd2Q8R3K3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ptcd2Q8R3K3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ptcd2Q8R3K3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ptcd2Q8R3K3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ptcd2Q8R3K3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
Ptcd2Q8R3K3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ptcd2Q8R3K3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.17■■□□□ 1.62
Ptcd2Q8R3K3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ptcd2Q8R3K3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.17■■□□□ 1.62
Ptcd2Q8R3K3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Ptcd2Q8R3K3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ptcd2Q8R3K3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ptcd2Q8R3K3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ptcd2Q8R3K3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.15■■□□□ 1.62
Ptcd2Q8R3K3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.14■■□□□ 1.62
Ptcd2Q8R3K3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.14■■□□□ 1.62
Ptcd2Q8R3K3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.14■■□□□ 1.62
Ptcd2Q8R3K3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Ptcd2Q8R3K3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ptcd2Q8R3K3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ptcd2Q8R3K3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ptcd2Q8R3K3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Ptcd2Q8R3K3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.12■■□□□ 1.61
Ptcd2Q8R3K3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.12■■□□□ 1.61
Ptcd2Q8R3K3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ptcd2Q8R3K3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ptcd2Q8R3K3 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.11■■□□□ 1.61
Ptcd2Q8R3K3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ptcd2Q8R3K3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ptcd2Q8R3K3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ptcd2Q8R3K3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ptcd2Q8R3K3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ptcd2Q8R3K3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ptcd2Q8R3K3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Ptcd2Q8R3K3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.08■■□□□ 1.61
Ptcd2Q8R3K3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ptcd2Q8R3K3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Ptcd2Q8R3K3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms