Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.12■■□□□ 1.61
Rpp40Q8R1F9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Rpp40Q8R1F9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rpp40Q8R1F9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Rpp40Q8R1F9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rpp40Q8R1F9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Rpp40Q8R1F9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.1■■□□□ 1.61
Rpp40Q8R1F9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.09■■□□□ 1.61
Rpp40Q8R1F9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rpp40Q8R1F9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rpp40Q8R1F9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rpp40Q8R1F9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rpp40Q8R1F9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rpp40Q8R1F9 Gm4799-201ENSMUST00000095396 657 ntBASIC25.07■■□□□ 1.6
Rpp40Q8R1F9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rpp40Q8R1F9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rpp40Q8R1F9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rpp40Q8R1F9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Rpp40Q8R1F9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.05■■□□□ 1.6
Rpp40Q8R1F9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rpp40Q8R1F9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.05■■□□□ 1.6
Rpp40Q8R1F9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rpp40Q8R1F9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rpp40Q8R1F9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rpp40Q8R1F9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rpp40Q8R1F9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rpp40Q8R1F9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.03■■□□□ 1.6
Rpp40Q8R1F9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rpp40Q8R1F9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rpp40Q8R1F9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.02■■□□□ 1.6
Rpp40Q8R1F9 Gm6311-201ENSMUST00000073790 878 ntBASIC25.02■■□□□ 1.6
Rpp40Q8R1F9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Rpp40Q8R1F9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Rpp40Q8R1F9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rpp40Q8R1F9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
Rpp40Q8R1F9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Rpp40Q8R1F9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Rpp40Q8R1F9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.98■■□□□ 1.59
Rpp40Q8R1F9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
Rpp40Q8R1F9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpp40Q8R1F9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.97■■□□□ 1.59
Rpp40Q8R1F9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Rpp40Q8R1F9 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.97■■□□□ 1.59
Rpp40Q8R1F9 Mir3960-201ENSMUST00000198213 73 ntBASIC24.97■■□□□ 1.59
Rpp40Q8R1F9 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.97■■□□□ 1.59
Rpp40Q8R1F9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rpp40Q8R1F9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpp40Q8R1F9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.96■■□□□ 1.59
Rpp40Q8R1F9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.96■■□□□ 1.59
Rpp40Q8R1F9 Gm45364-201ENSMUST00000210883 159 ntBASIC24.96■■□□□ 1.59
Rpp40Q8R1F9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.96■■□□□ 1.59
Rpp40Q8R1F9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Rpp40Q8R1F9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.95■■□□□ 1.58
Rpp40Q8R1F9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rpp40Q8R1F9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rpp40Q8R1F9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.94■■□□□ 1.58
Rpp40Q8R1F9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rpp40Q8R1F9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rpp40Q8R1F9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rpp40Q8R1F9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rpp40Q8R1F9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Rpp40Q8R1F9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rpp40Q8R1F9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rpp40Q8R1F9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
Rpp40Q8R1F9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.92■■□□□ 1.58
Rpp40Q8R1F9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.92■■□□□ 1.58
Rpp40Q8R1F9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Rpp40Q8R1F9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpp40Q8R1F9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Rpp40Q8R1F9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpp40Q8R1F9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Rpp40Q8R1F9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpp40Q8R1F9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpp40Q8R1F9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Rpp40Q8R1F9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpp40Q8R1F9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rpp40Q8R1F9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
Rpp40Q8R1F9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rpp40Q8R1F9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rpp40Q8R1F9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rpp40Q8R1F9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Rpp40Q8R1F9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Rpp40Q8R1F9 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.87■■□□□ 1.57
Rpp40Q8R1F9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rpp40Q8R1F9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rpp40Q8R1F9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rpp40Q8R1F9 Gm11175-201ENSMUST00000116172 543 ntBASIC24.86■■□□□ 1.57
Rpp40Q8R1F9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Rpp40Q8R1F9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.86■■□□□ 1.57
Rpp40Q8R1F9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rpp40Q8R1F9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rpp40Q8R1F9 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.86■■□□□ 1.57
Rpp40Q8R1F9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Rpp40Q8R1F9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.84■■□□□ 1.57
Rpp40Q8R1F9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rpp40Q8R1F9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Rpp40Q8R1F9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Rpp40Q8R1F9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.82■■□□□ 1.56
Rpp40Q8R1F9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rpp40Q8R1F9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms