Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Sf3a1Q8K4Z5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Sf3a1Q8K4Z5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Sf3a1Q8K4Z5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Sf3a1Q8K4Z5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Sf3a1Q8K4Z5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Sf3a1Q8K4Z5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.44■■■□□ 2.14
Sf3a1Q8K4Z5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Sf3a1Q8K4Z5 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.42■■■□□ 2.14
Sf3a1Q8K4Z5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sf3a1Q8K4Z5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sf3a1Q8K4Z5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sf3a1Q8K4Z5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sf3a1Q8K4Z5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
Sf3a1Q8K4Z5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Sf3a1Q8K4Z5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28.4■■■□□ 2.14
Sf3a1Q8K4Z5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Sf3a1Q8K4Z5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Sf3a1Q8K4Z5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Sf3a1Q8K4Z5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Sf3a1Q8K4Z5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Sf3a1Q8K4Z5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.37■■■□□ 2.13
Sf3a1Q8K4Z5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
Sf3a1Q8K4Z5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Sf3a1Q8K4Z5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Sf3a1Q8K4Z5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Sf3a1Q8K4Z5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Sf3a1Q8K4Z5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Sf3a1Q8K4Z5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.34■■■□□ 2.13
Sf3a1Q8K4Z5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Sf3a1Q8K4Z5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Sf3a1Q8K4Z5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Sf3a1Q8K4Z5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Sf3a1Q8K4Z5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Sf3a1Q8K4Z5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC28.32■■■□□ 2.12
Sf3a1Q8K4Z5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Sf3a1Q8K4Z5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.31■■■□□ 2.12
Sf3a1Q8K4Z5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Sf3a1Q8K4Z5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Sf3a1Q8K4Z5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Sf3a1Q8K4Z5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Sf3a1Q8K4Z5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Sf3a1Q8K4Z5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Sf3a1Q8K4Z5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Sf3a1Q8K4Z5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Sf3a1Q8K4Z5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
Sf3a1Q8K4Z5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Sf3a1Q8K4Z5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.26■■■□□ 2.11
Sf3a1Q8K4Z5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Sf3a1Q8K4Z5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Sf3a1Q8K4Z5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Sf3a1Q8K4Z5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Sf3a1Q8K4Z5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.25■■■□□ 2.11
Sf3a1Q8K4Z5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Sf3a1Q8K4Z5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
Sf3a1Q8K4Z5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Sf3a1Q8K4Z5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Sf3a1Q8K4Z5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.23■■■□□ 2.11
Sf3a1Q8K4Z5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Sf3a1Q8K4Z5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.23■■■□□ 2.11
Sf3a1Q8K4Z5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Sf3a1Q8K4Z5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.22■■■□□ 2.11
Sf3a1Q8K4Z5 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.22■■■□□ 2.11
Sf3a1Q8K4Z5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Sf3a1Q8K4Z5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Sf3a1Q8K4Z5 Gm4799-201ENSMUST00000095396 657 ntBASIC28.21■■■□□ 2.11
Sf3a1Q8K4Z5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Sf3a1Q8K4Z5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC28.2■■■□□ 2.1
Sf3a1Q8K4Z5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Sf3a1Q8K4Z5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Sf3a1Q8K4Z5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.18■■■□□ 2.1
Sf3a1Q8K4Z5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Sf3a1Q8K4Z5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Sf3a1Q8K4Z5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
Sf3a1Q8K4Z5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
Sf3a1Q8K4Z5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Sf3a1Q8K4Z5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sf3a1Q8K4Z5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sf3a1Q8K4Z5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sf3a1Q8K4Z5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sf3a1Q8K4Z5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Sf3a1Q8K4Z5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
Sf3a1Q8K4Z5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Sf3a1Q8K4Z5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.14■■■□□ 2.1
Sf3a1Q8K4Z5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC28.14■■■□□ 2.1
Sf3a1Q8K4Z5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.09
Sf3a1Q8K4Z5 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.13■■■□□ 2.09
Sf3a1Q8K4Z5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.13■■■□□ 2.09
Sf3a1Q8K4Z5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sf3a1Q8K4Z5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sf3a1Q8K4Z5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sf3a1Q8K4Z5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sf3a1Q8K4Z5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sf3a1Q8K4Z5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sf3a1Q8K4Z5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sf3a1Q8K4Z5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Sf3a1Q8K4Z5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Sf3a1Q8K4Z5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Sf3a1Q8K4Z5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Sf3a1Q8K4Z5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 132 ms