Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrtm1Q8BXQ3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Gm37136-201ENSMUST00000194368 194 ntBASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Lrtm1Q8BXQ3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrtm1Q8BXQ3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrtm1Q8BXQ3 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.35■□□□□ 0.85
Lrtm1Q8BXQ3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrtm1Q8BXQ3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.35■□□□□ 0.85
Lrtm1Q8BXQ3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrtm1Q8BXQ3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.35■□□□□ 0.85
Lrtm1Q8BXQ3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrtm1Q8BXQ3 Gm11599-201ENSMUST00000118720 878 ntBASIC20.34■□□□□ 0.85
Lrtm1Q8BXQ3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lrtm1Q8BXQ3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrtm1Q8BXQ3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrtm1Q8BXQ3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrtm1Q8BXQ3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrtm1Q8BXQ3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrtm1Q8BXQ3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrtm1Q8BXQ3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.31■□□□□ 0.84
Lrtm1Q8BXQ3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.3■□□□□ 0.84
Lrtm1Q8BXQ3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrtm1Q8BXQ3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrtm1Q8BXQ3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Lrtm1Q8BXQ3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrtm1Q8BXQ3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrtm1Q8BXQ3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lrtm1Q8BXQ3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrtm1Q8BXQ3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.28■□□□□ 0.84
Lrtm1Q8BXQ3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrtm1Q8BXQ3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Lrtm1Q8BXQ3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrtm1Q8BXQ3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrtm1Q8BXQ3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrtm1Q8BXQ3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lrtm1Q8BXQ3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Lrtm1Q8BXQ3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lrtm1Q8BXQ3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.25■□□□□ 0.83
Lrtm1Q8BXQ3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Lrtm1Q8BXQ3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Lrtm1Q8BXQ3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrtm1Q8BXQ3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrtm1Q8BXQ3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrtm1Q8BXQ3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrtm1Q8BXQ3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrtm1Q8BXQ3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrtm1Q8BXQ3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lrtm1Q8BXQ3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lrtm1Q8BXQ3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lrtm1Q8BXQ3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrtm1Q8BXQ3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrtm1Q8BXQ3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.21■□□□□ 0.83
Lrtm1Q8BXQ3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Lrtm1Q8BXQ3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Lrtm1Q8BXQ3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrtm1Q8BXQ3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrtm1Q8BXQ3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrtm1Q8BXQ3 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.18■□□□□ 0.82
Lrtm1Q8BXQ3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lrtm1Q8BXQ3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrtm1Q8BXQ3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Lrtm1Q8BXQ3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Lrtm1Q8BXQ3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Lrtm1Q8BXQ3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lrtm1Q8BXQ3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrtm1Q8BXQ3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrtm1Q8BXQ3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrtm1Q8BXQ3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrtm1Q8BXQ3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrtm1Q8BXQ3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Lrtm1Q8BXQ3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Lrtm1Q8BXQ3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lrtm1Q8BXQ3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Lrtm1Q8BXQ3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrtm1Q8BXQ3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrtm1Q8BXQ3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrtm1Q8BXQ3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrtm1Q8BXQ3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.12■□□□□ 0.81
Lrtm1Q8BXQ3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrtm1Q8BXQ3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrtm1Q8BXQ3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.11■□□□□ 0.81
Lrtm1Q8BXQ3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lrtm1Q8BXQ3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.1■□□□□ 0.81
Lrtm1Q8BXQ3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.1■□□□□ 0.81
Lrtm1Q8BXQ3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Lrtm1Q8BXQ3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrtm1Q8BXQ3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrtm1Q8BXQ3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Lrtm1Q8BXQ3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrtm1Q8BXQ3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrtm1Q8BXQ3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrtm1Q8BXQ3 Gm4799-201ENSMUST00000095396 657 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms