Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.74■□□□□ 0.75
Lsm11Q8BUV6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm11Q8BUV6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm11Q8BUV6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm11Q8BUV6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Lsm11Q8BUV6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm11Q8BUV6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm11Q8BUV6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.72■□□□□ 0.75
Lsm11Q8BUV6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm11Q8BUV6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.71■□□□□ 0.75
Lsm11Q8BUV6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.71■□□□□ 0.75
Lsm11Q8BUV6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.71■□□□□ 0.75
Lsm11Q8BUV6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm11Q8BUV6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm11Q8BUV6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.7■□□□□ 0.74
Lsm11Q8BUV6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm11Q8BUV6 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.7■□□□□ 0.74
Lsm11Q8BUV6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm11Q8BUV6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm11Q8BUV6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Lsm11Q8BUV6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm11Q8BUV6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm11Q8BUV6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm11Q8BUV6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.69■□□□□ 0.74
Lsm11Q8BUV6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm11Q8BUV6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.69■□□□□ 0.74
Lsm11Q8BUV6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Lsm11Q8BUV6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm11Q8BUV6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm11Q8BUV6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Lsm11Q8BUV6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Lsm11Q8BUV6 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.68■□□□□ 0.74
Lsm11Q8BUV6 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.68■□□□□ 0.74
Lsm11Q8BUV6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm11Q8BUV6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm11Q8BUV6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Lsm11Q8BUV6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm11Q8BUV6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm11Q8BUV6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.65■□□□□ 0.74
Lsm11Q8BUV6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lsm11Q8BUV6 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.63■□□□□ 0.73
Lsm11Q8BUV6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm11Q8BUV6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm11Q8BUV6 Gm30023-201ENSMUST00000197970 889 ntBASIC19.63■□□□□ 0.73
Lsm11Q8BUV6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Lsm11Q8BUV6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm11Q8BUV6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Lsm11Q8BUV6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm11Q8BUV6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm11Q8BUV6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm11Q8BUV6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm11Q8BUV6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm11Q8BUV6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm11Q8BUV6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm11Q8BUV6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm11Q8BUV6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm11Q8BUV6 Particl-201ENSMUST00000205370 1560 ntBASIC19.59■□□□□ 0.73
Lsm11Q8BUV6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm11Q8BUV6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm11Q8BUV6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm11Q8BUV6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm11Q8BUV6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Lsm11Q8BUV6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lsm11Q8BUV6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Lsm11Q8BUV6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Lsm11Q8BUV6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Lsm11Q8BUV6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lsm11Q8BUV6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.58■□□□□ 0.72
Lsm11Q8BUV6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm11Q8BUV6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm11Q8BUV6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Lsm11Q8BUV6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm11Q8BUV6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Lsm11Q8BUV6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Lsm11Q8BUV6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Lsm11Q8BUV6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm11Q8BUV6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.57■□□□□ 0.72
Lsm11Q8BUV6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm11Q8BUV6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.56■□□□□ 0.72
Lsm11Q8BUV6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Lsm11Q8BUV6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm11Q8BUV6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm11Q8BUV6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.55■□□□□ 0.72
Lsm11Q8BUV6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Lsm11Q8BUV6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm11Q8BUV6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.54■□□□□ 0.72
Lsm11Q8BUV6 Zfp131-205ENSMUST00000223812 663 ntBASIC19.53■□□□□ 0.72
Lsm11Q8BUV6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Lsm11Q8BUV6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm11Q8BUV6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm11Q8BUV6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm11Q8BUV6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm11Q8BUV6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.52■□□□□ 0.72
Lsm11Q8BUV6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm11Q8BUV6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm11Q8BUV6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Lsm11Q8BUV6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lsm11Q8BUV6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lsm11Q8BUV6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm11Q8BUV6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms