Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
VmacQ8BP01 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.03■■□□□ 1.92
VmacQ8BP01 Gm7432-201ENSMUST00000210343 879 ntBASIC27.03■■□□□ 1.92
VmacQ8BP01 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
VmacQ8BP01 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
VmacQ8BP01 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
VmacQ8BP01 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
VmacQ8BP01 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
VmacQ8BP01 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
VmacQ8BP01 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
VmacQ8BP01 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
VmacQ8BP01 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.01■■□□□ 1.91
VmacQ8BP01 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
VmacQ8BP01 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
VmacQ8BP01 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27■■□□□ 1.91
VmacQ8BP01 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.99■■□□□ 1.91
VmacQ8BP01 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
VmacQ8BP01 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
VmacQ8BP01 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
VmacQ8BP01 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
VmacQ8BP01 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
VmacQ8BP01 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
VmacQ8BP01 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
VmacQ8BP01 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
VmacQ8BP01 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.96■■□□□ 1.91
VmacQ8BP01 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
VmacQ8BP01 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
VmacQ8BP01 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
VmacQ8BP01 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
VmacQ8BP01 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
VmacQ8BP01 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VmacQ8BP01 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
VmacQ8BP01 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
VmacQ8BP01 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
VmacQ8BP01 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
VmacQ8BP01 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
VmacQ8BP01 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
VmacQ8BP01 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.92■■□□□ 1.9
VmacQ8BP01 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
VmacQ8BP01 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
VmacQ8BP01 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
VmacQ8BP01 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
VmacQ8BP01 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
VmacQ8BP01 Gm11599-201ENSMUST00000118720 878 ntBASIC26.91■■□□□ 1.9
VmacQ8BP01 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
VmacQ8BP01 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
VmacQ8BP01 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
VmacQ8BP01 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
VmacQ8BP01 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
VmacQ8BP01 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
VmacQ8BP01 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
VmacQ8BP01 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
VmacQ8BP01 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
VmacQ8BP01 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
VmacQ8BP01 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
VmacQ8BP01 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.88■■□□□ 1.89
VmacQ8BP01 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.88■■□□□ 1.89
VmacQ8BP01 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.88■■□□□ 1.89
VmacQ8BP01 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
VmacQ8BP01 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VmacQ8BP01 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VmacQ8BP01 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
VmacQ8BP01 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
VmacQ8BP01 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
VmacQ8BP01 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
VmacQ8BP01 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.81■■□□□ 1.88
VmacQ8BP01 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
VmacQ8BP01 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
VmacQ8BP01 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
VmacQ8BP01 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VmacQ8BP01 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
VmacQ8BP01 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
VmacQ8BP01 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
VmacQ8BP01 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
VmacQ8BP01 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
VmacQ8BP01 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.78■■□□□ 1.88
VmacQ8BP01 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
VmacQ8BP01 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
VmacQ8BP01 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
VmacQ8BP01 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
VmacQ8BP01 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
VmacQ8BP01 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
VmacQ8BP01 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
VmacQ8BP01 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.73■■□□□ 1.87
VmacQ8BP01 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
VmacQ8BP01 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
VmacQ8BP01 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
VmacQ8BP01 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.72■■□□□ 1.87
VmacQ8BP01 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
VmacQ8BP01 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VmacQ8BP01 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
VmacQ8BP01 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.71■■□□□ 1.87
VmacQ8BP01 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
VmacQ8BP01 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
VmacQ8BP01 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
VmacQ8BP01 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
VmacQ8BP01 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
VmacQ8BP01 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
VmacQ8BP01 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
VmacQ8BP01 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms