Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Srrm4Q8BKA3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm4Q8BKA3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm4Q8BKA3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Srrm4Q8BKA3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Srrm4Q8BKA3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Srrm4Q8BKA3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
Srrm4Q8BKA3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm4Q8BKA3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm4Q8BKA3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.13■□□□□ 0.81
Srrm4Q8BKA3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Srrm4Q8BKA3 Particl-201ENSMUST00000205370 1560 ntBASIC20.12■□□□□ 0.81
Srrm4Q8BKA3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Srrm4Q8BKA3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Srrm4Q8BKA3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.12■□□□□ 0.81
Srrm4Q8BKA3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Srrm4Q8BKA3 Gm11599-201ENSMUST00000118720 878 ntBASIC20.11■□□□□ 0.81
Srrm4Q8BKA3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.11■□□□□ 0.81
Srrm4Q8BKA3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Srrm4Q8BKA3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm4Q8BKA3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm4Q8BKA3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.1■□□□□ 0.81
Srrm4Q8BKA3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Srrm4Q8BKA3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm4Q8BKA3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Srrm4Q8BKA3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Srrm4Q8BKA3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Srrm4Q8BKA3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Srrm4Q8BKA3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Srrm4Q8BKA3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Srrm4Q8BKA3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.08■□□□□ 0.81
Srrm4Q8BKA3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Srrm4Q8BKA3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Srrm4Q8BKA3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Srrm4Q8BKA3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.06■□□□□ 0.8
Srrm4Q8BKA3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srrm4Q8BKA3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Srrm4Q8BKA3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Srrm4Q8BKA3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Srrm4Q8BKA3 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.04■□□□□ 0.8
Srrm4Q8BKA3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Srrm4Q8BKA3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm4Q8BKA3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm4Q8BKA3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm4Q8BKA3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm4Q8BKA3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Srrm4Q8BKA3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm4Q8BKA3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm4Q8BKA3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Srrm4Q8BKA3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Srrm4Q8BKA3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Srrm4Q8BKA3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.99■□□□□ 0.79
Srrm4Q8BKA3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srrm4Q8BKA3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Srrm4Q8BKA3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Srrm4Q8BKA3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Srrm4Q8BKA3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Srrm4Q8BKA3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Srrm4Q8BKA3 Gm37136-201ENSMUST00000194368 194 ntBASIC19.96■□□□□ 0.79
Srrm4Q8BKA3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Srrm4Q8BKA3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.96■□□□□ 0.79
Srrm4Q8BKA3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Srrm4Q8BKA3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Srrm4Q8BKA3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Srrm4Q8BKA3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Srrm4Q8BKA3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Srrm4Q8BKA3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Srrm4Q8BKA3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Srrm4Q8BKA3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Srrm4Q8BKA3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Srrm4Q8BKA3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Srrm4Q8BKA3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Srrm4Q8BKA3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Srrm4Q8BKA3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Srrm4Q8BKA3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.92■□□□□ 0.78
Srrm4Q8BKA3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Srrm4Q8BKA3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Srrm4Q8BKA3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Srrm4Q8BKA3 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.92■□□□□ 0.78
Srrm4Q8BKA3 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.92■□□□□ 0.78
Srrm4Q8BKA3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Srrm4Q8BKA3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Srrm4Q8BKA3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Srrm4Q8BKA3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.91■□□□□ 0.78
Srrm4Q8BKA3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Srrm4Q8BKA3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Srrm4Q8BKA3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.9■□□□□ 0.78
Srrm4Q8BKA3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Srrm4Q8BKA3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Srrm4Q8BKA3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Srrm4Q8BKA3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Srrm4Q8BKA3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Srrm4Q8BKA3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Srrm4Q8BKA3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Srrm4Q8BKA3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Srrm4Q8BKA3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Srrm4Q8BKA3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Srrm4Q8BKA3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Srrm4Q8BKA3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Srrm4Q8BKA3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms