Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.57■■□□□ 1.2
Hmbox1Q8BJA3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Hmbox1Q8BJA3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.57■■□□□ 1.2
Hmbox1Q8BJA3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Hmbox1Q8BJA3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hmbox1Q8BJA3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.55■■□□□ 1.2
Hmbox1Q8BJA3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Hmbox1Q8BJA3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hmbox1Q8BJA3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Hmbox1Q8BJA3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Hmbox1Q8BJA3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.54■■□□□ 1.2
Hmbox1Q8BJA3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hmbox1Q8BJA3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hmbox1Q8BJA3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.53■■□□□ 1.2
Hmbox1Q8BJA3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hmbox1Q8BJA3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Hmbox1Q8BJA3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hmbox1Q8BJA3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Hmbox1Q8BJA3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Hmbox1Q8BJA3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.52■■□□□ 1.2
Hmbox1Q8BJA3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.52■■□□□ 1.2
Hmbox1Q8BJA3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hmbox1Q8BJA3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Hmbox1Q8BJA3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Hmbox1Q8BJA3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Hmbox1Q8BJA3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Hmbox1Q8BJA3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Hmbox1Q8BJA3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.51■■□□□ 1.19
Hmbox1Q8BJA3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Hmbox1Q8BJA3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Hmbox1Q8BJA3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.5■■□□□ 1.19
Hmbox1Q8BJA3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.5■■□□□ 1.19
Hmbox1Q8BJA3 Gm12366-201ENSMUST00000121722 873 ntBASIC22.5■■□□□ 1.19
Hmbox1Q8BJA3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.5■■□□□ 1.19
Hmbox1Q8BJA3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.5■■□□□ 1.19
Hmbox1Q8BJA3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.5■■□□□ 1.19
Hmbox1Q8BJA3 Gm5786-201ENSMUST00000085368 882 ntBASIC22.5■■□□□ 1.19
Hmbox1Q8BJA3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.5■■□□□ 1.19
Hmbox1Q8BJA3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Hmbox1Q8BJA3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hmbox1Q8BJA3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hmbox1Q8BJA3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hmbox1Q8BJA3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Hmbox1Q8BJA3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.47■■□□□ 1.19
Hmbox1Q8BJA3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hmbox1Q8BJA3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hmbox1Q8BJA3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.46■■□□□ 1.19
Hmbox1Q8BJA3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Hmbox1Q8BJA3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hmbox1Q8BJA3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hmbox1Q8BJA3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hmbox1Q8BJA3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hmbox1Q8BJA3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hmbox1Q8BJA3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hmbox1Q8BJA3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hmbox1Q8BJA3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hmbox1Q8BJA3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Hmbox1Q8BJA3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hmbox1Q8BJA3 Scarna2-201ENSMUST00000157560 414 ntBASIC22.42■■□□□ 1.18
Hmbox1Q8BJA3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.42■■□□□ 1.18
Hmbox1Q8BJA3 Gm22567-201ENSMUST00000175542 342 ntBASIC22.42■■□□□ 1.18
Hmbox1Q8BJA3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hmbox1Q8BJA3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hmbox1Q8BJA3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Hmbox1Q8BJA3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Hmbox1Q8BJA3 Gm11687-201ENSMUST00000118911 886 ntBASIC22.41■■□□□ 1.18
Hmbox1Q8BJA3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.41■■□□□ 1.18
Hmbox1Q8BJA3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.41■■□□□ 1.18
Hmbox1Q8BJA3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.41■■□□□ 1.18
Hmbox1Q8BJA3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hmbox1Q8BJA3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Hmbox1Q8BJA3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Hmbox1Q8BJA3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Hmbox1Q8BJA3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Hmbox1Q8BJA3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Hmbox1Q8BJA3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
Hmbox1Q8BJA3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Hmbox1Q8BJA3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hmbox1Q8BJA3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hmbox1Q8BJA3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Hmbox1Q8BJA3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hmbox1Q8BJA3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hmbox1Q8BJA3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.36■■□□□ 1.17
Hmbox1Q8BJA3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hmbox1Q8BJA3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.35■■□□□ 1.17
Hmbox1Q8BJA3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hmbox1Q8BJA3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hmbox1Q8BJA3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Hmbox1Q8BJA3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Hmbox1Q8BJA3 Gm9806-201ENSMUST00000051080 552 ntBASIC22.33■■□□□ 1.17
Hmbox1Q8BJA3 Gm4799-201ENSMUST00000095396 657 ntBASIC22.33■■□□□ 1.17
Hmbox1Q8BJA3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Hmbox1Q8BJA3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Hmbox1Q8BJA3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hmbox1Q8BJA3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Hmbox1Q8BJA3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Hmbox1Q8BJA3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hmbox1Q8BJA3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hmbox1Q8BJA3 Gm7332-201ENSMUST00000118351 454 ntBASIC22.31■■□□□ 1.16
Hmbox1Q8BJA3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms