Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Sptlc3Q8BG54 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Sptlc3Q8BG54 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.23■■■□□ 2.11
Sptlc3Q8BG54 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28.22■■■□□ 2.11
Sptlc3Q8BG54 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Sptlc3Q8BG54 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.21■■■□□ 2.11
Sptlc3Q8BG54 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Sptlc3Q8BG54 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Sptlc3Q8BG54 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Sptlc3Q8BG54 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Sptlc3Q8BG54 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.2■■■□□ 2.1
Sptlc3Q8BG54 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Sptlc3Q8BG54 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.19■■■□□ 2.1
Sptlc3Q8BG54 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC28.19■■■□□ 2.1
Sptlc3Q8BG54 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Sptlc3Q8BG54 Scarna2-201ENSMUST00000157560 414 ntBASIC28.18■■■□□ 2.1
Sptlc3Q8BG54 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Sptlc3Q8BG54 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Sptlc3Q8BG54 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Sptlc3Q8BG54 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.16■■■□□ 2.1
Sptlc3Q8BG54 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Sptlc3Q8BG54 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Sptlc3Q8BG54 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sptlc3Q8BG54 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Sptlc3Q8BG54 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Sptlc3Q8BG54 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Sptlc3Q8BG54 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.14■■■□□ 2.09
Sptlc3Q8BG54 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Sptlc3Q8BG54 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sptlc3Q8BG54 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.13■■■□□ 2.09
Sptlc3Q8BG54 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sptlc3Q8BG54 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Sptlc3Q8BG54 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.11■■■□□ 2.09
Sptlc3Q8BG54 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Sptlc3Q8BG54 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.1■■■□□ 2.09
Sptlc3Q8BG54 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Sptlc3Q8BG54 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
Sptlc3Q8BG54 Gm9806-201ENSMUST00000051080 552 ntBASIC28.09■■■□□ 2.09
Sptlc3Q8BG54 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Sptlc3Q8BG54 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Sptlc3Q8BG54 Cap2-205ENSMUST00000225824 1634 ntBASIC28.08■■■□□ 2.09
Sptlc3Q8BG54 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Sptlc3Q8BG54 Gm16437-201ENSMUST00000025669 507 ntBASIC28.08■■■□□ 2.09
Sptlc3Q8BG54 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Sptlc3Q8BG54 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Sptlc3Q8BG54 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Sptlc3Q8BG54 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.07■■■□□ 2.08
Sptlc3Q8BG54 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Sptlc3Q8BG54 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Sptlc3Q8BG54 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Sptlc3Q8BG54 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Sptlc3Q8BG54 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Sptlc3Q8BG54 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Sptlc3Q8BG54 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Sptlc3Q8BG54 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Sptlc3Q8BG54 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.04■■■□□ 2.08
Sptlc3Q8BG54 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Sptlc3Q8BG54 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sptlc3Q8BG54 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sptlc3Q8BG54 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sptlc3Q8BG54 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Sptlc3Q8BG54 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Sptlc3Q8BG54 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Sptlc3Q8BG54 Gm9812-201ENSMUST00000061934 968 ntBASIC28.03■■■□□ 2.08
Sptlc3Q8BG54 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Sptlc3Q8BG54 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Sptlc3Q8BG54 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Sptlc3Q8BG54 Gm11687-201ENSMUST00000118911 886 ntBASIC28.02■■■□□ 2.08
Sptlc3Q8BG54 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Sptlc3Q8BG54 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28■■■□□ 2.07
Sptlc3Q8BG54 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Sptlc3Q8BG54 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Sptlc3Q8BG54 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Sptlc3Q8BG54 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.98■■■□□ 2.07
Sptlc3Q8BG54 AC122317.2-201ENSMUST00000218708 1248 ntBASIC27.98■■■□□ 2.07
Sptlc3Q8BG54 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Sptlc3Q8BG54 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Sptlc3Q8BG54 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.97■■■□□ 2.07
Sptlc3Q8BG54 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Sptlc3Q8BG54 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Sptlc3Q8BG54 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
Sptlc3Q8BG54 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Sptlc3Q8BG54 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
Sptlc3Q8BG54 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
Sptlc3Q8BG54 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Sptlc3Q8BG54 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.94■■■□□ 2.06
Sptlc3Q8BG54 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Sptlc3Q8BG54 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
Sptlc3Q8BG54 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Sptlc3Q8BG54 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.93■■■□□ 2.06
Sptlc3Q8BG54 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Sptlc3Q8BG54 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Sptlc3Q8BG54 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
Sptlc3Q8BG54 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.92■■■□□ 2.06
Sptlc3Q8BG54 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Sptlc3Q8BG54 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sptlc3Q8BG54 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.91■■■□□ 2.06
Sptlc3Q8BG54 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Sptlc3Q8BG54 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Sptlc3Q8BG54 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms