Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upk3bQ80YF6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk3bQ80YF6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk3bQ80YF6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk3bQ80YF6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Upk3bQ80YF6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.61■□□□□ 0.73
Upk3bQ80YF6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk3bQ80YF6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.6■□□□□ 0.73
Upk3bQ80YF6 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.6■□□□□ 0.73
Upk3bQ80YF6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk3bQ80YF6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk3bQ80YF6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk3bQ80YF6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk3bQ80YF6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Upk3bQ80YF6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk3bQ80YF6 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.6■□□□□ 0.73
Upk3bQ80YF6 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.6■□□□□ 0.73
Upk3bQ80YF6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Upk3bQ80YF6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.59■□□□□ 0.73
Upk3bQ80YF6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.59■□□□□ 0.73
Upk3bQ80YF6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Upk3bQ80YF6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Upk3bQ80YF6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Upk3bQ80YF6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Upk3bQ80YF6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Upk3bQ80YF6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Upk3bQ80YF6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Upk3bQ80YF6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.57■□□□□ 0.72
Upk3bQ80YF6 Zfp131-205ENSMUST00000223812 663 ntBASIC19.57■□□□□ 0.72
Upk3bQ80YF6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Upk3bQ80YF6 Particl-201ENSMUST00000205370 1560 ntBASIC19.57■□□□□ 0.72
Upk3bQ80YF6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Upk3bQ80YF6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk3bQ80YF6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk3bQ80YF6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Upk3bQ80YF6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk3bQ80YF6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Upk3bQ80YF6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.55■□□□□ 0.72
Upk3bQ80YF6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Upk3bQ80YF6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.54■□□□□ 0.72
Upk3bQ80YF6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.54■□□□□ 0.72
Upk3bQ80YF6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Upk3bQ80YF6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Upk3bQ80YF6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upk3bQ80YF6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Upk3bQ80YF6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Upk3bQ80YF6 Gm30023-201ENSMUST00000197970 889 ntBASIC19.52■□□□□ 0.72
Upk3bQ80YF6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upk3bQ80YF6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Upk3bQ80YF6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.51■□□□□ 0.71
Upk3bQ80YF6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Upk3bQ80YF6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
Upk3bQ80YF6 Gm24970-201ENSMUST00000175582 82 ntBASIC19.5■□□□□ 0.71
Upk3bQ80YF6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upk3bQ80YF6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upk3bQ80YF6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upk3bQ80YF6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upk3bQ80YF6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upk3bQ80YF6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upk3bQ80YF6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Upk3bQ80YF6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upk3bQ80YF6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Upk3bQ80YF6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Upk3bQ80YF6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Upk3bQ80YF6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Upk3bQ80YF6 Gm9397-201ENSMUST00000200125 605 ntBASIC19.47■□□□□ 0.71
Upk3bQ80YF6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Upk3bQ80YF6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.46■□□□□ 0.71
Upk3bQ80YF6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Upk3bQ80YF6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Upk3bQ80YF6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Upk3bQ80YF6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.45■□□□□ 0.7
Upk3bQ80YF6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.44■□□□□ 0.7
Upk3bQ80YF6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bQ80YF6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bQ80YF6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Upk3bQ80YF6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bQ80YF6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk3bQ80YF6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Upk3bQ80YF6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk3bQ80YF6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk3bQ80YF6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Upk3bQ80YF6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Upk3bQ80YF6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Upk3bQ80YF6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk3bQ80YF6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Upk3bQ80YF6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk3bQ80YF6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Upk3bQ80YF6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk3bQ80YF6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Upk3bQ80YF6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Upk3bQ80YF6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Upk3bQ80YF6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Upk3bQ80YF6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Upk3bQ80YF6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Upk3bQ80YF6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk3bQ80YF6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk3bQ80YF6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Upk3bQ80YF6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upk3bQ80YF6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms