Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vrk1Q80X41 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vrk1Q80X41 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vrk1Q80X41 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.29■■□□□ 1.16
Vrk1Q80X41 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Vrk1Q80X41 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.28■■□□□ 1.16
Vrk1Q80X41 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vrk1Q80X41 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vrk1Q80X41 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vrk1Q80X41 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vrk1Q80X41 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vrk1Q80X41 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Vrk1Q80X41 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vrk1Q80X41 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Vrk1Q80X41 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vrk1Q80X41 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Vrk1Q80X41 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.26■■□□□ 1.15
Vrk1Q80X41 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vrk1Q80X41 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Vrk1Q80X41 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Vrk1Q80X41 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.25■■□□□ 1.15
Vrk1Q80X41 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vrk1Q80X41 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
Vrk1Q80X41 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Vrk1Q80X41 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vrk1Q80X41 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Vrk1Q80X41 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.23■■□□□ 1.15
Vrk1Q80X41 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Vrk1Q80X41 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vrk1Q80X41 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.22■■□□□ 1.15
Vrk1Q80X41 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vrk1Q80X41 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
Vrk1Q80X41 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vrk1Q80X41 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vrk1Q80X41 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vrk1Q80X41 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vrk1Q80X41 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Vrk1Q80X41 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vrk1Q80X41 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Vrk1Q80X41 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vrk1Q80X41 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Vrk1Q80X41 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vrk1Q80X41 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.18■■□□□ 1.14
Vrk1Q80X41 Amer2-203ENSMUST00000225247 2662 ntBASIC22.18■■□□□ 1.14
Vrk1Q80X41 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vrk1Q80X41 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vrk1Q80X41 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vrk1Q80X41 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Vrk1Q80X41 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.16■■□□□ 1.14
Vrk1Q80X41 Gm27502-201ENSMUST00000183495 199 ntBASIC22.16■■□□□ 1.14
Vrk1Q80X41 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Vrk1Q80X41 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vrk1Q80X41 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vrk1Q80X41 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vrk1Q80X41 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Vrk1Q80X41 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Vrk1Q80X41 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.14
Vrk1Q80X41 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Vrk1Q80X41 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.14■■□□□ 1.13
Vrk1Q80X41 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vrk1Q80X41 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vrk1Q80X41 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vrk1Q80X41 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Vrk1Q80X41 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Vrk1Q80X41 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Vrk1Q80X41 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vrk1Q80X41 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.13■■□□□ 1.13
Vrk1Q80X41 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vrk1Q80X41 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
Vrk1Q80X41 Gm7332-201ENSMUST00000118351 454 ntBASIC22.13■■□□□ 1.13
Vrk1Q80X41 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.13■■□□□ 1.13
Vrk1Q80X41 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vrk1Q80X41 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Vrk1Q80X41 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.12■■□□□ 1.13
Vrk1Q80X41 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vrk1Q80X41 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vrk1Q80X41 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vrk1Q80X41 Gm9812-201ENSMUST00000061934 968 ntBASIC22.11■■□□□ 1.13
Vrk1Q80X41 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Vrk1Q80X41 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.11■■□□□ 1.13
Vrk1Q80X41 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vrk1Q80X41 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vrk1Q80X41 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vrk1Q80X41 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vrk1Q80X41 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vrk1Q80X41 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vrk1Q80X41 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.08■■□□□ 1.13
Vrk1Q80X41 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Vrk1Q80X41 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.08■■□□□ 1.13
Vrk1Q80X41 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Vrk1Q80X41 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Vrk1Q80X41 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.08■■□□□ 1.12
Vrk1Q80X41 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vrk1Q80X41 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vrk1Q80X41 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vrk1Q80X41 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.07■■□□□ 1.12
Vrk1Q80X41 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vrk1Q80X41 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vrk1Q80X41 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vrk1Q80X41 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms