Protein–RNA interactions for Protein: Q6NZF1

Zc3h11a, Zinc finger CCCH domain-containing protein 11A, mousemouse

Known RBP Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h11aQ6NZF1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.64■■□□□ 1.21
Zc3h11aQ6NZF1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.21
Zc3h11aQ6NZF1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Zc3h11aQ6NZF1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Zc3h11aQ6NZF1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Zc3h11aQ6NZF1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Zc3h11aQ6NZF1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Zc3h11aQ6NZF1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Zc3h11aQ6NZF1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Zc3h11aQ6NZF1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Zc3h11aQ6NZF1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Zc3h11aQ6NZF1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Zc3h11aQ6NZF1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.61■■□□□ 1.21
Zc3h11aQ6NZF1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.61■■□□□ 1.21
Zc3h11aQ6NZF1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Zc3h11aQ6NZF1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Zc3h11aQ6NZF1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Zc3h11aQ6NZF1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Zc3h11aQ6NZF1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Zc3h11aQ6NZF1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Zc3h11aQ6NZF1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Zc3h11aQ6NZF1 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.57■■□□□ 1.2
Zc3h11aQ6NZF1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.57■■□□□ 1.2
Zc3h11aQ6NZF1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Zc3h11aQ6NZF1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Zc3h11aQ6NZF1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Zc3h11aQ6NZF1 Gm37136-201ENSMUST00000194368 194 ntBASIC22.56■■□□□ 1.2
Zc3h11aQ6NZF1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Zc3h11aQ6NZF1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Zc3h11aQ6NZF1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Zc3h11aQ6NZF1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Zc3h11aQ6NZF1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Zc3h11aQ6NZF1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Zc3h11aQ6NZF1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Zc3h11aQ6NZF1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Zc3h11aQ6NZF1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Zc3h11aQ6NZF1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Zc3h11aQ6NZF1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Zc3h11aQ6NZF1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Zc3h11aQ6NZF1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Zc3h11aQ6NZF1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Zc3h11aQ6NZF1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.52■■□□□ 1.2
Zc3h11aQ6NZF1 Gm11599-201ENSMUST00000118720 878 ntBASIC22.52■■□□□ 1.2
Zc3h11aQ6NZF1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.52■■□□□ 1.2
Zc3h11aQ6NZF1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Zc3h11aQ6NZF1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Zc3h11aQ6NZF1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.5■■□□□ 1.19
Zc3h11aQ6NZF1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Zc3h11aQ6NZF1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
Zc3h11aQ6NZF1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zc3h11aQ6NZF1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zc3h11aQ6NZF1 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.48■■□□□ 1.19
Zc3h11aQ6NZF1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zc3h11aQ6NZF1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.47■■□□□ 1.19
Zc3h11aQ6NZF1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.47■■□□□ 1.19
Zc3h11aQ6NZF1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zc3h11aQ6NZF1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zc3h11aQ6NZF1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zc3h11aQ6NZF1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zc3h11aQ6NZF1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zc3h11aQ6NZF1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Zc3h11aQ6NZF1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Zc3h11aQ6NZF1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Zc3h11aQ6NZF1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.44■■□□□ 1.18
Zc3h11aQ6NZF1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Zc3h11aQ6NZF1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Zc3h11aQ6NZF1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Zc3h11aQ6NZF1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
Zc3h11aQ6NZF1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zc3h11aQ6NZF1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zc3h11aQ6NZF1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Zc3h11aQ6NZF1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.41■■□□□ 1.18
Zc3h11aQ6NZF1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Zc3h11aQ6NZF1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Zc3h11aQ6NZF1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Zc3h11aQ6NZF1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
Zc3h11aQ6NZF1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Zc3h11aQ6NZF1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Zc3h11aQ6NZF1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Zc3h11aQ6NZF1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.39■■□□□ 1.18
Zc3h11aQ6NZF1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Zc3h11aQ6NZF1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Zc3h11aQ6NZF1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Zc3h11aQ6NZF1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Zc3h11aQ6NZF1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Zc3h11aQ6NZF1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Zc3h11aQ6NZF1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Zc3h11aQ6NZF1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Zc3h11aQ6NZF1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Zc3h11aQ6NZF1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Zc3h11aQ6NZF1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Zc3h11aQ6NZF1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Zc3h11aQ6NZF1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Zc3h11aQ6NZF1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Zc3h11aQ6NZF1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Zc3h11aQ6NZF1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Zc3h11aQ6NZF1 Gm4799-201ENSMUST00000095396 657 ntBASIC22.34■■□□□ 1.17
Zc3h11aQ6NZF1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Zc3h11aQ6NZF1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Zc3h11aQ6NZF1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms