Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pds5aQ6A026 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pds5aQ6A026 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Pds5aQ6A026 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pds5aQ6A026 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Pds5aQ6A026 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pds5aQ6A026 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Pds5aQ6A026 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Pds5aQ6A026 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Pds5aQ6A026 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pds5aQ6A026 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pds5aQ6A026 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pds5aQ6A026 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.16■■□□□ 1.62
Pds5aQ6A026 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pds5aQ6A026 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pds5aQ6A026 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.13■■□□□ 1.61
Pds5aQ6A026 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pds5aQ6A026 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pds5aQ6A026 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pds5aQ6A026 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pds5aQ6A026 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pds5aQ6A026 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pds5aQ6A026 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pds5aQ6A026 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.11■■□□□ 1.61
Pds5aQ6A026 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Pds5aQ6A026 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pds5aQ6A026 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pds5aQ6A026 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Pds5aQ6A026 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.1■■□□□ 1.61
Pds5aQ6A026 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Pds5aQ6A026 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pds5aQ6A026 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Pds5aQ6A026 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.09■■□□□ 1.61
Pds5aQ6A026 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.09■■□□□ 1.61
Pds5aQ6A026 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pds5aQ6A026 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.08■■□□□ 1.6
Pds5aQ6A026 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pds5aQ6A026 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pds5aQ6A026 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pds5aQ6A026 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pds5aQ6A026 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Pds5aQ6A026 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pds5aQ6A026 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pds5aQ6A026 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pds5aQ6A026 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pds5aQ6A026 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Pds5aQ6A026 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pds5aQ6A026 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pds5aQ6A026 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pds5aQ6A026 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pds5aQ6A026 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.02■■□□□ 1.6
Pds5aQ6A026 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Pds5aQ6A026 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Pds5aQ6A026 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Pds5aQ6A026 Gm4799-201ENSMUST00000095396 657 ntBASIC25.02■■□□□ 1.6
Pds5aQ6A026 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pds5aQ6A026 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Pds5aQ6A026 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pds5aQ6A026 Gm13889-201ENSMUST00000099689 1386 ntBASIC25.01■■□□□ 1.59
Pds5aQ6A026 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.01■■□□□ 1.59
Pds5aQ6A026 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.01■■□□□ 1.59
Pds5aQ6A026 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Pds5aQ6A026 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pds5aQ6A026 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.01■■□□□ 1.59
Pds5aQ6A026 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
Pds5aQ6A026 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Pds5aQ6A026 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25■■□□□ 1.59
Pds5aQ6A026 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pds5aQ6A026 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25■■□□□ 1.59
Pds5aQ6A026 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pds5aQ6A026 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pds5aQ6A026 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pds5aQ6A026 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Pds5aQ6A026 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.99■■□□□ 1.59
Pds5aQ6A026 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.99■■□□□ 1.59
Pds5aQ6A026 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pds5aQ6A026 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pds5aQ6A026 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.98■■□□□ 1.59
Pds5aQ6A026 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pds5aQ6A026 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pds5aQ6A026 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pds5aQ6A026 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pds5aQ6A026 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.96■■□□□ 1.59
Pds5aQ6A026 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Pds5aQ6A026 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.96■■□□□ 1.59
Pds5aQ6A026 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pds5aQ6A026 Mir3960-201ENSMUST00000198213 73 ntBASIC24.95■■□□□ 1.58
Pds5aQ6A026 Gm45364-201ENSMUST00000210883 159 ntBASIC24.95■■□□□ 1.58
Pds5aQ6A026 Gm6311-201ENSMUST00000073790 878 ntBASIC24.95■■□□□ 1.58
Pds5aQ6A026 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pds5aQ6A026 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.93■■□□□ 1.58
Pds5aQ6A026 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.93■■□□□ 1.58
Pds5aQ6A026 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms