Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Gm7432-201ENSMUST00000210343 879 ntBASIC21.27■■□□□ 1
Rpa2Q62193 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Rpa2Q62193 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rpa2Q62193 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rpa2Q62193 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.26■□□□□ 0.99
Rpa2Q62193 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.26■□□□□ 0.99
Rpa2Q62193 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpa2Q62193 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpa2Q62193 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rpa2Q62193 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rpa2Q62193 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rpa2Q62193 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpa2Q62193 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpa2Q62193 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
Rpa2Q62193 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.24■□□□□ 0.99
Rpa2Q62193 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpa2Q62193 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.23■□□□□ 0.99
Rpa2Q62193 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpa2Q62193 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.22■□□□□ 0.99
Rpa2Q62193 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpa2Q62193 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.22■□□□□ 0.99
Rpa2Q62193 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.22■□□□□ 0.99
Rpa2Q62193 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rpa2Q62193 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rpa2Q62193 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.21■□□□□ 0.99
Rpa2Q62193 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.2■□□□□ 0.98
Rpa2Q62193 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.2■□□□□ 0.98
Rpa2Q62193 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpa2Q62193 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpa2Q62193 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpa2Q62193 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rpa2Q62193 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpa2Q62193 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpa2Q62193 Gm11599-201ENSMUST00000118720 878 ntBASIC21.18■□□□□ 0.98
Rpa2Q62193 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.18■□□□□ 0.98
Rpa2Q62193 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpa2Q62193 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Rpa2Q62193 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rpa2Q62193 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpa2Q62193 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rpa2Q62193 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpa2Q62193 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpa2Q62193 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpa2Q62193 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rpa2Q62193 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rpa2Q62193 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpa2Q62193 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpa2Q62193 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpa2Q62193 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.14■□□□□ 0.97
Rpa2Q62193 Gm37136-201ENSMUST00000194368 194 ntBASIC21.14■□□□□ 0.97
Rpa2Q62193 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Rpa2Q62193 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rpa2Q62193 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpa2Q62193 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rpa2Q62193 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpa2Q62193 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rpa2Q62193 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpa2Q62193 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpa2Q62193 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpa2Q62193 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpa2Q62193 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpa2Q62193 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpa2Q62193 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpa2Q62193 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpa2Q62193 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpa2Q62193 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpa2Q62193 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpa2Q62193 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpa2Q62193 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpa2Q62193 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpa2Q62193 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rpa2Q62193 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpa2Q62193 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rpa2Q62193 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rpa2Q62193 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Rpa2Q62193 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpa2Q62193 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpa2Q62193 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.07■□□□□ 0.96
Rpa2Q62193 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rpa2Q62193 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpa2Q62193 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Rpa2Q62193 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Rpa2Q62193 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rpa2Q62193 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpa2Q62193 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpa2Q62193 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.05■□□□□ 0.96
Rpa2Q62193 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpa2Q62193 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpa2Q62193 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rpa2Q62193 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpa2Q62193 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.01■□□□□ 0.95
Rpa2Q62193 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.01■□□□□ 0.95
Rpa2Q62193 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpa2Q62193 Gm4799-201ENSMUST00000095396 657 ntBASIC21.01■□□□□ 0.95
Rpa2Q62193 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rpa2Q62193 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpa2Q62193 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpa2Q62193 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpa2Q62193 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpa2Q62193 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms