Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Satb1Q60611 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Satb1Q60611 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Satb1Q60611 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Satb1Q60611 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Satb1Q60611 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.93■■□□□ 1.42
Satb1Q60611 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.92■■□□□ 1.42
Satb1Q60611 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.92■■□□□ 1.42
Satb1Q60611 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Satb1Q60611 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Satb1Q60611 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Satb1Q60611 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Satb1Q60611 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Satb1Q60611 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Satb1Q60611 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Satb1Q60611 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Satb1Q60611 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Satb1Q60611 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.89■■□□□ 1.41
Satb1Q60611 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.89■■□□□ 1.41
Satb1Q60611 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Satb1Q60611 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Satb1Q60611 Gm5921-201ENSMUST00000075898 882 ntBASIC23.88■■□□□ 1.41
Satb1Q60611 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Satb1Q60611 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Satb1Q60611 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Satb1Q60611 Mir3960-201ENSMUST00000198213 73 ntBASIC23.87■■□□□ 1.41
Satb1Q60611 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Satb1Q60611 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Satb1Q60611 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Satb1Q60611 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Satb1Q60611 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Satb1Q60611 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Satb1Q60611 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
Satb1Q60611 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Satb1Q60611 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Satb1Q60611 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Satb1Q60611 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.85■■□□□ 1.41
Satb1Q60611 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Satb1Q60611 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Satb1Q60611 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Satb1Q60611 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Satb1Q60611 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Satb1Q60611 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.83■■□□□ 1.41
Satb1Q60611 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.82■■□□□ 1.4
Satb1Q60611 Gm30023-201ENSMUST00000197970 889 ntBASIC23.82■■□□□ 1.4
Satb1Q60611 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Satb1Q60611 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Satb1Q60611 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Satb1Q60611 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Satb1Q60611 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Satb1Q60611 Gm45364-201ENSMUST00000210883 159 ntBASIC23.81■■□□□ 1.4
Satb1Q60611 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Satb1Q60611 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Satb1Q60611 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Satb1Q60611 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Satb1Q60611 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.8■■□□□ 1.4
Satb1Q60611 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Satb1Q60611 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Satb1Q60611 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Satb1Q60611 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Satb1Q60611 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.77■■□□□ 1.4
Satb1Q60611 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Satb1Q60611 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.76■■□□□ 1.39
Satb1Q60611 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Satb1Q60611 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Satb1Q60611 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.76■■□□□ 1.39
Satb1Q60611 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Satb1Q60611 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Satb1Q60611 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Satb1Q60611 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.75■■□□□ 1.39
Satb1Q60611 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Satb1Q60611 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Satb1Q60611 Gm10420-201ENSMUST00000121713 882 ntBASIC23.74■■□□□ 1.39
Satb1Q60611 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Satb1Q60611 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Satb1Q60611 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Satb1Q60611 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Satb1Q60611 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.73■■□□□ 1.39
Satb1Q60611 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.73■■□□□ 1.39
Satb1Q60611 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Satb1Q60611 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.72■■□□□ 1.39
Satb1Q60611 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.72■■□□□ 1.39
Satb1Q60611 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Satb1Q60611 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Satb1Q60611 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Satb1Q60611 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Satb1Q60611 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Satb1Q60611 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.69■■□□□ 1.38
Satb1Q60611 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Satb1Q60611 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Satb1Q60611 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.69■■□□□ 1.38
Satb1Q60611 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.69■■□□□ 1.38
Satb1Q60611 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Satb1Q60611 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Satb1Q60611 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Satb1Q60611 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Satb1Q60611 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.68■■□□□ 1.38
Satb1Q60611 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Satb1Q60611 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Satb1Q60611 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms