Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav3-3Q5R1C3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav3-3Q5R1C3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav3-3Q5R1C3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav3-3Q5R1C3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav3-3Q5R1C3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav3-3Q5R1C3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav3-3Q5R1C3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trav3-3Q5R1C3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav3-3Q5R1C3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav3-3Q5R1C3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav3-3Q5R1C3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav3-3Q5R1C3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav3-3Q5R1C3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trav3-3Q5R1C3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav3-3Q5R1C3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav3-3Q5R1C3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav3-3Q5R1C3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav3-3Q5R1C3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav3-3Q5R1C3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav3-3Q5R1C3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav3-3Q5R1C3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.32■□□□□ 0.36
Trav3-3Q5R1C3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav3-3Q5R1C3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav3-3Q5R1C3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav3-3Q5R1C3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav3-3Q5R1C3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav3-3Q5R1C3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav3-3Q5R1C3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav3-3Q5R1C3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav3-3Q5R1C3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trav3-3Q5R1C3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav3-3Q5R1C3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3-3Q5R1C3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3-3Q5R1C3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3-3Q5R1C3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3-3Q5R1C3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3-3Q5R1C3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3-3Q5R1C3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3-3Q5R1C3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav3-3Q5R1C3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav3-3Q5R1C3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav3-3Q5R1C3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav3-3Q5R1C3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav3-3Q5R1C3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav3-3Q5R1C3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.28■□□□□ 0.36
Trav3-3Q5R1C3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav3-3Q5R1C3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trav3-3Q5R1C3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav3-3Q5R1C3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav3-3Q5R1C3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav3-3Q5R1C3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav3-3Q5R1C3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav3-3Q5R1C3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav3-3Q5R1C3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav3-3Q5R1C3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav3-3Q5R1C3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav3-3Q5R1C3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav3-3Q5R1C3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Trav3-3Q5R1C3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trav3-3Q5R1C3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav3-3Q5R1C3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav3-3Q5R1C3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Trav3-3Q5R1C3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav3-3Q5R1C3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav3-3Q5R1C3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav3-3Q5R1C3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Trav3-3Q5R1C3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav3-3Q5R1C3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav3-3Q5R1C3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav3-3Q5R1C3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav3-3Q5R1C3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav3-3Q5R1C3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav3-3Q5R1C3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav3-3Q5R1C3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav3-3Q5R1C3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav3-3Q5R1C3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Trav3-3Q5R1C3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav3-3Q5R1C3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Trav3-3Q5R1C3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav3-3Q5R1C3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav3-3Q5R1C3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav3-3Q5R1C3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav3-3Q5R1C3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav3-3Q5R1C3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav3-3Q5R1C3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav3-3Q5R1C3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav3-3Q5R1C3 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.2■□□□□ 0.34
Trav3-3Q5R1C3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav3-3Q5R1C3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav3-3Q5R1C3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav3-3Q5R1C3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav3-3Q5R1C3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav3-3Q5R1C3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav3-3Q5R1C3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav3-3Q5R1C3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav3-3Q5R1C3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav3-3Q5R1C3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav3-3Q5R1C3 Gm26115-201ENSMUST00000175605 87 ntBASIC17.18■□□□□ 0.34
Trav3-3Q5R1C3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms