Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmem40Q4FJU9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tmem40Q4FJU9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmem40Q4FJU9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tmem40Q4FJU9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.77■□□□□ 0.76
Tmem40Q4FJU9 Gm11687-201ENSMUST00000118911 886 ntBASIC19.77■□□□□ 0.76
Tmem40Q4FJU9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tmem40Q4FJU9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmem40Q4FJU9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Tmem40Q4FJU9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Tmem40Q4FJU9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tmem40Q4FJU9 Gm9806-201ENSMUST00000051080 552 ntBASIC19.75■□□□□ 0.75
Tmem40Q4FJU9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tmem40Q4FJU9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tmem40Q4FJU9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Tmem40Q4FJU9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tmem40Q4FJU9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tmem40Q4FJU9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tmem40Q4FJU9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tmem40Q4FJU9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tmem40Q4FJU9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tmem40Q4FJU9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tmem40Q4FJU9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tmem40Q4FJU9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tmem40Q4FJU9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.72■□□□□ 0.75
Tmem40Q4FJU9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.72■□□□□ 0.75
Tmem40Q4FJU9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tmem40Q4FJU9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tmem40Q4FJU9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.71■□□□□ 0.75
Tmem40Q4FJU9 Gm12366-201ENSMUST00000121722 873 ntBASIC19.71■□□□□ 0.75
Tmem40Q4FJU9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.71■□□□□ 0.75
Tmem40Q4FJU9 Gm16437-201ENSMUST00000025669 507 ntBASIC19.71■□□□□ 0.75
Tmem40Q4FJU9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tmem40Q4FJU9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.71■□□□□ 0.75
Tmem40Q4FJU9 Gm5786-201ENSMUST00000085368 882 ntBASIC19.71■□□□□ 0.75
Tmem40Q4FJU9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tmem40Q4FJU9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tmem40Q4FJU9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Tmem40Q4FJU9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmem40Q4FJU9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmem40Q4FJU9 Gm4799-201ENSMUST00000095396 657 ntBASIC19.7■□□□□ 0.74
Tmem40Q4FJU9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Tmem40Q4FJU9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmem40Q4FJU9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Tmem40Q4FJU9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.69■□□□□ 0.74
Tmem40Q4FJU9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.69■□□□□ 0.74
Tmem40Q4FJU9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmem40Q4FJU9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.68■□□□□ 0.74
Tmem40Q4FJU9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tmem40Q4FJU9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmem40Q4FJU9 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.68■□□□□ 0.74
Tmem40Q4FJU9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tmem40Q4FJU9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmem40Q4FJU9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmem40Q4FJU9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tmem40Q4FJU9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Tmem40Q4FJU9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmem40Q4FJU9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tmem40Q4FJU9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tmem40Q4FJU9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmem40Q4FJU9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmem40Q4FJU9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tmem40Q4FJU9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Tmem40Q4FJU9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.65■□□□□ 0.74
Tmem40Q4FJU9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmem40Q4FJU9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tmem40Q4FJU9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmem40Q4FJU9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmem40Q4FJU9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tmem40Q4FJU9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tmem40Q4FJU9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tmem40Q4FJU9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tmem40Q4FJU9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tmem40Q4FJU9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.63■□□□□ 0.73
Tmem40Q4FJU9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.63■□□□□ 0.73
Tmem40Q4FJU9 Mir3960-201ENSMUST00000198213 73 ntBASIC19.62■□□□□ 0.73
Tmem40Q4FJU9 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.62■□□□□ 0.73
Tmem40Q4FJU9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tmem40Q4FJU9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tmem40Q4FJU9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem40Q4FJU9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem40Q4FJU9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem40Q4FJU9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem40Q4FJU9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem40Q4FJU9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem40Q4FJU9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem40Q4FJU9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem40Q4FJU9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem40Q4FJU9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem40Q4FJU9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem40Q4FJU9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.59■□□□□ 0.73
Tmem40Q4FJU9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.59■□□□□ 0.73
Tmem40Q4FJU9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem40Q4FJU9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Tmem40Q4FJU9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tmem40Q4FJU9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.58■□□□□ 0.72
Tmem40Q4FJU9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tmem40Q4FJU9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tmem40Q4FJU9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem40Q4FJU9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms