Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.97■■□□□ 1.11
Khdc4Q3TCX3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Khdc4Q3TCX3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Khdc4Q3TCX3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Khdc4Q3TCX3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Khdc4Q3TCX3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Khdc4Q3TCX3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Khdc4Q3TCX3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Khdc4Q3TCX3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Khdc4Q3TCX3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Khdc4Q3TCX3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Khdc4Q3TCX3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Khdc4Q3TCX3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Khdc4Q3TCX3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Khdc4Q3TCX3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Khdc4Q3TCX3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Khdc4Q3TCX3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.92■■□□□ 1.1
Khdc4Q3TCX3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.91■■□□□ 1.1
Khdc4Q3TCX3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Khdc4Q3TCX3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Khdc4Q3TCX3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Khdc4Q3TCX3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Khdc4Q3TCX3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Khdc4Q3TCX3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Khdc4Q3TCX3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Khdc4Q3TCX3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.89■■□□□ 1.09
Khdc4Q3TCX3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Khdc4Q3TCX3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Khdc4Q3TCX3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Khdc4Q3TCX3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Khdc4Q3TCX3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Khdc4Q3TCX3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Khdc4Q3TCX3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Khdc4Q3TCX3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Khdc4Q3TCX3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.84■■□□□ 1.09
Khdc4Q3TCX3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Khdc4Q3TCX3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Khdc4Q3TCX3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
Khdc4Q3TCX3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Khdc4Q3TCX3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Khdc4Q3TCX3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.83■■□□□ 1.09
Khdc4Q3TCX3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Khdc4Q3TCX3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Khdc4Q3TCX3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Khdc4Q3TCX3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Khdc4Q3TCX3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Khdc4Q3TCX3 Scarna2-201ENSMUST00000157560 414 ntBASIC21.82■■□□□ 1.08
Khdc4Q3TCX3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Khdc4Q3TCX3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Khdc4Q3TCX3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
Khdc4Q3TCX3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.82■■□□□ 1.08
Khdc4Q3TCX3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Khdc4Q3TCX3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.82■■□□□ 1.08
Khdc4Q3TCX3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.81■■□□□ 1.08
Khdc4Q3TCX3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Khdc4Q3TCX3 Gm4799-201ENSMUST00000095396 657 ntBASIC21.81■■□□□ 1.08
Khdc4Q3TCX3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Khdc4Q3TCX3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Khdc4Q3TCX3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Khdc4Q3TCX3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Khdc4Q3TCX3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Khdc4Q3TCX3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Khdc4Q3TCX3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Khdc4Q3TCX3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Khdc4Q3TCX3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Khdc4Q3TCX3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Khdc4Q3TCX3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.78■■□□□ 1.08
Khdc4Q3TCX3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Khdc4Q3TCX3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Khdc4Q3TCX3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.78■■□□□ 1.08
Khdc4Q3TCX3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Khdc4Q3TCX3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Khdc4Q3TCX3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Khdc4Q3TCX3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Khdc4Q3TCX3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Khdc4Q3TCX3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Khdc4Q3TCX3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Khdc4Q3TCX3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Khdc4Q3TCX3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Khdc4Q3TCX3 Gm11687-201ENSMUST00000118911 886 ntBASIC21.75■■□□□ 1.07
Khdc4Q3TCX3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.75■■□□□ 1.07
Khdc4Q3TCX3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Khdc4Q3TCX3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.74■■□□□ 1.07
Khdc4Q3TCX3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Khdc4Q3TCX3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.74■■□□□ 1.07
Khdc4Q3TCX3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Khdc4Q3TCX3 Gm9806-201ENSMUST00000051080 552 ntBASIC21.74■■□□□ 1.07
Khdc4Q3TCX3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Khdc4Q3TCX3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Khdc4Q3TCX3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Khdc4Q3TCX3 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.73■■□□□ 1.07
Khdc4Q3TCX3 Gm16437-201ENSMUST00000025669 507 ntBASIC21.73■■□□□ 1.07
Khdc4Q3TCX3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Khdc4Q3TCX3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Khdc4Q3TCX3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Khdc4Q3TCX3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Khdc4Q3TCX3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Khdc4Q3TCX3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Khdc4Q3TCX3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.71■■□□□ 1.07
Khdc4Q3TCX3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms