Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim63Q38HM4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim63Q38HM4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Trim63Q38HM4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim63Q38HM4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim63Q38HM4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim63Q38HM4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim63Q38HM4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trim63Q38HM4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim63Q38HM4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Trim63Q38HM4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.32■□□□□ 0.68
Trim63Q38HM4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim63Q38HM4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Trim63Q38HM4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim63Q38HM4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim63Q38HM4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim63Q38HM4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim63Q38HM4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim63Q38HM4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim63Q38HM4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.29■□□□□ 0.68
Trim63Q38HM4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim63Q38HM4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim63Q38HM4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim63Q38HM4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim63Q38HM4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim63Q38HM4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim63Q38HM4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim63Q38HM4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim63Q38HM4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Trim63Q38HM4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim63Q38HM4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim63Q38HM4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim63Q38HM4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim63Q38HM4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim63Q38HM4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim63Q38HM4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim63Q38HM4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim63Q38HM4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim63Q38HM4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim63Q38HM4 Notumos-201ENSMUST00000151998 2659 ntBASIC19.24■□□□□ 0.67
Trim63Q38HM4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim63Q38HM4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.24■□□□□ 0.67
Trim63Q38HM4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim63Q38HM4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim63Q38HM4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim63Q38HM4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim63Q38HM4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim63Q38HM4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim63Q38HM4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim63Q38HM4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim63Q38HM4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim63Q38HM4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim63Q38HM4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim63Q38HM4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim63Q38HM4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim63Q38HM4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim63Q38HM4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim63Q38HM4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim63Q38HM4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim63Q38HM4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim63Q38HM4 Gm27325-201ENSMUST00000175467 74 ntBASIC19.21■□□□□ 0.67
Trim63Q38HM4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim63Q38HM4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim63Q38HM4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim63Q38HM4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim63Q38HM4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim63Q38HM4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim63Q38HM4 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.19■□□□□ 0.66
Trim63Q38HM4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim63Q38HM4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim63Q38HM4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Trim63Q38HM4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim63Q38HM4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Trim63Q38HM4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim63Q38HM4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim63Q38HM4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim63Q38HM4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim63Q38HM4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim63Q38HM4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim63Q38HM4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim63Q38HM4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim63Q38HM4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim63Q38HM4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.17■□□□□ 0.66
Trim63Q38HM4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim63Q38HM4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim63Q38HM4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim63Q38HM4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim63Q38HM4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Trim63Q38HM4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim63Q38HM4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim63Q38HM4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim63Q38HM4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim63Q38HM4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim63Q38HM4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim63Q38HM4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim63Q38HM4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim63Q38HM4 Mipep-204ENSMUST00000225043 1548 ntBASIC19.15■□□□□ 0.66
Trim63Q38HM4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim63Q38HM4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
Trim63Q38HM4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms