Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col10a1Q05306 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col10a1Q05306 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Col10a1Q05306 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.42■■□□□ 1.02
Col10a1Q05306 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Col10a1Q05306 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col10a1Q05306 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col10a1Q05306 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col10a1Q05306 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col10a1Q05306 Gm11599-201ENSMUST00000118720 878 ntBASIC21.4■■□□□ 1.02
Col10a1Q05306 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col10a1Q05306 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.39■■□□□ 1.02
Col10a1Q05306 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.39■■□□□ 1.01
Col10a1Q05306 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Col10a1Q05306 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.38■■□□□ 1.01
Col10a1Q05306 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Col10a1Q05306 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Col10a1Q05306 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Col10a1Q05306 Gm37136-201ENSMUST00000194368 194 ntBASIC21.38■■□□□ 1.01
Col10a1Q05306 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col10a1Q05306 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.38■■□□□ 1.01
Col10a1Q05306 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col10a1Q05306 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.37■■□□□ 1.01
Col10a1Q05306 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col10a1Q05306 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Col10a1Q05306 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col10a1Q05306 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col10a1Q05306 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col10a1Q05306 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col10a1Q05306 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col10a1Q05306 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.34■■□□□ 1.01
Col10a1Q05306 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col10a1Q05306 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Col10a1Q05306 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
Col10a1Q05306 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col10a1Q05306 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Col10a1Q05306 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.32■■□□□ 1
Col10a1Q05306 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col10a1Q05306 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Col10a1Q05306 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col10a1Q05306 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col10a1Q05306 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col10a1Q05306 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Col10a1Q05306 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col10a1Q05306 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Col10a1Q05306 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.3■■□□□ 1
Col10a1Q05306 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col10a1Q05306 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.3■■□□□ 1
Col10a1Q05306 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col10a1Q05306 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col10a1Q05306 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col10a1Q05306 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Col10a1Q05306 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col10a1Q05306 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col10a1Q05306 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col10a1Q05306 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Col10a1Q05306 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col10a1Q05306 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col10a1Q05306 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Col10a1Q05306 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.27■□□□□ 0.99
Col10a1Q05306 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.26■□□□□ 0.99
Col10a1Q05306 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col10a1Q05306 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Col10a1Q05306 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col10a1Q05306 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col10a1Q05306 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col10a1Q05306 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Col10a1Q05306 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Col10a1Q05306 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col10a1Q05306 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col10a1Q05306 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Col10a1Q05306 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col10a1Q05306 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col10a1Q05306 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col10a1Q05306 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col10a1Q05306 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.21■□□□□ 0.99
Col10a1Q05306 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col10a1Q05306 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col10a1Q05306 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col10a1Q05306 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col10a1Q05306 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col10a1Q05306 Gm4799-201ENSMUST00000095396 657 ntBASIC21.19■□□□□ 0.98
Col10a1Q05306 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col10a1Q05306 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col10a1Q05306 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col10a1Q05306 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Col10a1Q05306 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Col10a1Q05306 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Col10a1Q05306 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col10a1Q05306 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Col10a1Q05306 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.15■□□□□ 0.98
Col10a1Q05306 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Col10a1Q05306 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Col10a1Q05306 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.15■□□□□ 0.98
Col10a1Q05306 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.15■□□□□ 0.98
Col10a1Q05306 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.15■□□□□ 0.98
Col10a1Q05306 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col10a1Q05306 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col10a1Q05306 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Col10a1Q05306 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms