Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Hist1h3bP84228 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hist1h3bP84228 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hist1h3bP84228 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h3bP84228 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h3bP84228 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.35■□□□□ 0.85
Hist1h3bP84228 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Hist1h3bP84228 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hist1h3bP84228 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.34■□□□□ 0.85
Hist1h3bP84228 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hist1h3bP84228 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hist1h3bP84228 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.33■□□□□ 0.85
Hist1h3bP84228 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hist1h3bP84228 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.33■□□□□ 0.85
Hist1h3bP84228 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hist1h3bP84228 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hist1h3bP84228 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hist1h3bP84228 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h3bP84228 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h3bP84228 Gm6821-201ENSMUST00000107540 542 ntBASIC20.32■□□□□ 0.84
Hist1h3bP84228 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h3bP84228 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.32■□□□□ 0.84
Hist1h3bP84228 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h3bP84228 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h3bP84228 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.32■□□□□ 0.84
Hist1h3bP84228 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h3bP84228 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hist1h3bP84228 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hist1h3bP84228 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hist1h3bP84228 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hist1h3bP84228 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Hist1h3bP84228 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hist1h3bP84228 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hist1h3bP84228 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hist1h3bP84228 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hist1h3bP84228 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hist1h3bP84228 Gm8503-201ENSMUST00000118131 455 ntBASIC20.28■□□□□ 0.84
Hist1h3bP84228 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hist1h3bP84228 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hist1h3bP84228 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hist1h3bP84228 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hist1h3bP84228 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hist1h3bP84228 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hist1h3bP84228 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Hist1h3bP84228 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hist1h3bP84228 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Hist1h3bP84228 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hist1h3bP84228 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hist1h3bP84228 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hist1h3bP84228 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hist1h3bP84228 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hist1h3bP84228 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hist1h3bP84228 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.25■□□□□ 0.83
Hist1h3bP84228 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Hist1h3bP84228 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Hist1h3bP84228 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hist1h3bP84228 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hist1h3bP84228 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hist1h3bP84228 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hist1h3bP84228 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h3bP84228 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h3bP84228 Gm37136-201ENSMUST00000194368 194 ntBASIC20.22■□□□□ 0.83
Hist1h3bP84228 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hist1h3bP84228 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hist1h3bP84228 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hist1h3bP84228 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hist1h3bP84228 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Hist1h3bP84228 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hist1h3bP84228 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Hist1h3bP84228 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hist1h3bP84228 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.19■□□□□ 0.82
Hist1h3bP84228 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hist1h3bP84228 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hist1h3bP84228 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hist1h3bP84228 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hist1h3bP84228 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hist1h3bP84228 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hist1h3bP84228 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hist1h3bP84228 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h3bP84228 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h3bP84228 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.16■□□□□ 0.82
Hist1h3bP84228 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h3bP84228 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h3bP84228 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hist1h3bP84228 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Hist1h3bP84228 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hist1h3bP84228 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.15■□□□□ 0.82
Hist1h3bP84228 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hist1h3bP84228 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hist1h3bP84228 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Hist1h3bP84228 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hist1h3bP84228 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Hist1h3bP84228 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hist1h3bP84228 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hist1h3bP84228 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hist1h3bP84228 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hist1h3bP84228 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hist1h3bP84228 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hist1h3bP84228 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hist1h3bP84228 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms