Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SgcdP82347 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SgcdP82347 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SgcdP82347 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SgcdP82347 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SgcdP82347 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SgcdP82347 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.27■□□□□ 0.99
SgcdP82347 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SgcdP82347 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.26■□□□□ 0.99
SgcdP82347 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
SgcdP82347 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SgcdP82347 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgcdP82347 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgcdP82347 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SgcdP82347 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SgcdP82347 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
SgcdP82347 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SgcdP82347 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SgcdP82347 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SgcdP82347 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SgcdP82347 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SgcdP82347 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SgcdP82347 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SgcdP82347 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgcdP82347 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SgcdP82347 Gm24970-201ENSMUST00000175582 82 ntBASIC21.23■□□□□ 0.99
SgcdP82347 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.23■□□□□ 0.99
SgcdP82347 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SgcdP82347 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgcdP82347 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgcdP82347 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgcdP82347 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SgcdP82347 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SgcdP82347 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SgcdP82347 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SgcdP82347 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SgcdP82347 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.19■□□□□ 0.98
SgcdP82347 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SgcdP82347 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SgcdP82347 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.18■□□□□ 0.98
SgcdP82347 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SgcdP82347 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SgcdP82347 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SgcdP82347 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SgcdP82347 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SgcdP82347 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SgcdP82347 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SgcdP82347 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SgcdP82347 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SgcdP82347 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SgcdP82347 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SgcdP82347 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.16■□□□□ 0.98
SgcdP82347 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SgcdP82347 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SgcdP82347 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SgcdP82347 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SgcdP82347 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SgcdP82347 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.14■□□□□ 0.98
SgcdP82347 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.14■□□□□ 0.97
SgcdP82347 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SgcdP82347 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SgcdP82347 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SgcdP82347 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SgcdP82347 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SgcdP82347 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SgcdP82347 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SgcdP82347 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SgcdP82347 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SgcdP82347 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SgcdP82347 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SgcdP82347 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SgcdP82347 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SgcdP82347 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SgcdP82347 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.11■□□□□ 0.97
SgcdP82347 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SgcdP82347 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SgcdP82347 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SgcdP82347 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SgcdP82347 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SgcdP82347 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SgcdP82347 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SgcdP82347 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SgcdP82347 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SgcdP82347 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SgcdP82347 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.08■□□□□ 0.97
SgcdP82347 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SgcdP82347 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.08■□□□□ 0.97
SgcdP82347 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SgcdP82347 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SgcdP82347 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgcdP82347 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.07■□□□□ 0.96
SgcdP82347 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgcdP82347 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgcdP82347 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgcdP82347 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SgcdP82347 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SgcdP82347 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
SgcdP82347 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.06■□□□□ 0.96
SgcdP82347 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SgcdP82347 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms