Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ybx1P62960 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ybx1P62960 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ybx1P62960 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Ybx1P62960 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Ybx1P62960 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ybx1P62960 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.2■■□□□ 1.46
Ybx1P62960 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Ybx1P62960 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Ybx1P62960 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
Ybx1P62960 Gm27502-201ENSMUST00000183495 199 ntBASIC24.18■■□□□ 1.46
Ybx1P62960 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ybx1P62960 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ybx1P62960 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.17■■□□□ 1.46
Ybx1P62960 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Ybx1P62960 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ybx1P62960 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ybx1P62960 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ybx1P62960 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ybx1P62960 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ybx1P62960 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ybx1P62960 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.14■■□□□ 1.45
Ybx1P62960 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Ybx1P62960 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ybx1P62960 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ybx1P62960 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ybx1P62960 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.12■■□□□ 1.45
Ybx1P62960 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ybx1P62960 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ybx1P62960 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ybx1P62960 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Ybx1P62960 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ybx1P62960 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ybx1P62960 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ybx1P62960 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Ybx1P62960 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.09■■□□□ 1.45
Ybx1P62960 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.45
Ybx1P62960 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ybx1P62960 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.08■■□□□ 1.44
Ybx1P62960 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Ybx1P62960 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ybx1P62960 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ybx1P62960 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ybx1P62960 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ybx1P62960 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ybx1P62960 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ybx1P62960 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Ybx1P62960 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
Ybx1P62960 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.05■■□□□ 1.44
Ybx1P62960 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ybx1P62960 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ybx1P62960 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ybx1P62960 Gm7332-201ENSMUST00000118351 454 ntBASIC24.02■■□□□ 1.44
Ybx1P62960 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ybx1P62960 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.02■■□□□ 1.44
Ybx1P62960 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ybx1P62960 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ybx1P62960 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ybx1P62960 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ybx1P62960 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ybx1P62960 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ybx1P62960 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ybx1P62960 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ybx1P62960 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
Ybx1P62960 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ybx1P62960 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24■■□□□ 1.43
Ybx1P62960 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ybx1P62960 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Ybx1P62960 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ybx1P62960 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ybx1P62960 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ybx1P62960 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
Ybx1P62960 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.98■■□□□ 1.43
Ybx1P62960 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ybx1P62960 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.97■■□□□ 1.43
Ybx1P62960 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ybx1P62960 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ybx1P62960 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ybx1P62960 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ybx1P62960 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ybx1P62960 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ybx1P62960 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.96■■□□□ 1.43
Ybx1P62960 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ybx1P62960 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ybx1P62960 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ybx1P62960 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Ybx1P62960 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.95■■□□□ 1.43
Ybx1P62960 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ybx1P62960 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ybx1P62960 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.95■■□□□ 1.42
Ybx1P62960 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ybx1P62960 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ybx1P62960 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.94■■□□□ 1.42
Ybx1P62960 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.93■■□□□ 1.42
Ybx1P62960 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Ybx1P62960 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ybx1P62960 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ybx1P62960 Gm14523-201ENSMUST00000117260 558 ntBASIC23.92■■□□□ 1.42
Ybx1P62960 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.91■■□□□ 1.42
Ybx1P62960 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms