Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gabra1P62812 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Gabra1P62812 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gabra1P62812 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.53■□□□□ 0.72
Gabra1P62812 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gabra1P62812 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Gabra1P62812 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gabra1P62812 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Gabra1P62812 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gabra1P62812 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Gabra1P62812 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gabra1P62812 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gabra1P62812 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gabra1P62812 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gabra1P62812 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.5■□□□□ 0.71
Gabra1P62812 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gabra1P62812 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gabra1P62812 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gabra1P62812 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gabra1P62812 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.49■□□□□ 0.71
Gabra1P62812 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Gabra1P62812 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gabra1P62812 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gabra1P62812 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gabra1P62812 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gabra1P62812 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gabra1P62812 Gm26115-201ENSMUST00000175605 87 ntBASIC19.48■□□□□ 0.71
Gabra1P62812 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gabra1P62812 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gabra1P62812 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gabra1P62812 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.47■□□□□ 0.71
Gabra1P62812 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gabra1P62812 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gabra1P62812 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gabra1P62812 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.45■□□□□ 0.7
Gabra1P62812 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Gabra1P62812 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gabra1P62812 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gabra1P62812 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gabra1P62812 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gabra1P62812 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gabra1P62812 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gabra1P62812 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gabra1P62812 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.44■□□□□ 0.7
Gabra1P62812 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gabra1P62812 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gabra1P62812 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gabra1P62812 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gabra1P62812 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gabra1P62812 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gabra1P62812 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gabra1P62812 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gabra1P62812 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gabra1P62812 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gabra1P62812 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gabra1P62812 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gabra1P62812 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gabra1P62812 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gabra1P62812 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gabra1P62812 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gabra1P62812 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gabra1P62812 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Gabra1P62812 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gabra1P62812 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gabra1P62812 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabra1P62812 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Gabra1P62812 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabra1P62812 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.4■□□□□ 0.7
Gabra1P62812 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gabra1P62812 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabra1P62812 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabra1P62812 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabra1P62812 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gabra1P62812 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Gabra1P62812 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gabra1P62812 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gabra1P62812 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gabra1P62812 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gabra1P62812 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gabra1P62812 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gabra1P62812 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gabra1P62812 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gabra1P62812 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabra1P62812 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabra1P62812 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Gabra1P62812 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gabra1P62812 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gabra1P62812 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Gabra1P62812 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabra1P62812 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Gabra1P62812 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gabra1P62812 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gabra1P62812 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gabra1P62812 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gabra1P62812 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gabra1P62812 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gabra1P62812 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gabra1P62812 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gabra1P62812 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gabra1P62812 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms