Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Mmp20P57748 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Mmp20P57748 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Mmp20P57748 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Mmp20P57748 Zxda-201ENSMUST00000117281 2621 ntBASIC27.33■■□□□ 1.97
Mmp20P57748 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Mmp20P57748 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Mmp20P57748 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Mmp20P57748 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Mmp20P57748 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
Mmp20P57748 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Mmp20P57748 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.29■■□□□ 1.96
Mmp20P57748 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC27.29■■□□□ 1.96
Mmp20P57748 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Mmp20P57748 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.29■■□□□ 1.96
Mmp20P57748 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Mmp20P57748 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Mmp20P57748 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Mmp20P57748 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
Mmp20P57748 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Mmp20P57748 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Mmp20P57748 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.27■■□□□ 1.96
Mmp20P57748 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Mmp20P57748 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Mmp20P57748 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Mmp20P57748 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Mmp20P57748 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Mmp20P57748 Gm14523-201ENSMUST00000117260 558 ntBASIC27.26■■□□□ 1.95
Mmp20P57748 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Mmp20P57748 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Mmp20P57748 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Mmp20P57748 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.25■■□□□ 1.95
Mmp20P57748 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.24■■□□□ 1.95
Mmp20P57748 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Mmp20P57748 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Mmp20P57748 Gm9812-201ENSMUST00000061934 968 ntBASIC27.23■■□□□ 1.95
Mmp20P57748 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Mmp20P57748 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
Mmp20P57748 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC27.23■■□□□ 1.95
Mmp20P57748 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Mmp20P57748 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Mmp20P57748 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.23■■□□□ 1.95
Mmp20P57748 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
Mmp20P57748 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Mmp20P57748 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Mmp20P57748 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Mmp20P57748 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Mmp20P57748 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Mmp20P57748 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Mmp20P57748 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.2■■□□□ 1.94
Mmp20P57748 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC27.2■■□□□ 1.94
Mmp20P57748 AC122317.2-201ENSMUST00000218708 1248 ntBASIC27.19■■□□□ 1.94
Mmp20P57748 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Mmp20P57748 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Mmp20P57748 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Mmp20P57748 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
Mmp20P57748 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Mmp20P57748 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
Mmp20P57748 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Mmp20P57748 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Mmp20P57748 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.12■■□□□ 1.93
Mmp20P57748 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.12■■□□□ 1.93
Mmp20P57748 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.12■■□□□ 1.93
Mmp20P57748 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Mmp20P57748 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
Mmp20P57748 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.11■■□□□ 1.93
Mmp20P57748 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Mmp20P57748 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.1■■□□□ 1.93
Mmp20P57748 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Mmp20P57748 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.1■■□□□ 1.93
Mmp20P57748 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Mmp20P57748 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Mmp20P57748 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Mmp20P57748 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Mmp20P57748 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC27.07■■□□□ 1.92
Mmp20P57748 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.06■■□□□ 1.92
Mmp20P57748 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.06■■□□□ 1.92
Mmp20P57748 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Mmp20P57748 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Mmp20P57748 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27.05■■□□□ 1.92
Mmp20P57748 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Mmp20P57748 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Mmp20P57748 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.04■■□□□ 1.92
Mmp20P57748 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Mmp20P57748 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Mmp20P57748 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Mmp20P57748 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.03■■□□□ 1.92
Mmp20P57748 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Mmp20P57748 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.02■■□□□ 1.92
Mmp20P57748 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Mmp20P57748 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Mmp20P57748 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Mmp20P57748 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Mmp20P57748 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27■■□□□ 1.91
Mmp20P57748 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Mmp20P57748 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Mmp20P57748 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
Mmp20P57748 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Mmp20P57748 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Mmp20P57748 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms