Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
Sox3P53784 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Sox3P53784 Scarna2-201ENSMUST00000157560 414 ntBASIC22.09■■□□□ 1.13
Sox3P53784 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Sox3P53784 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sox3P53784 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sox3P53784 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sox3P53784 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Sox3P53784 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sox3P53784 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.08■■□□□ 1.13
Sox3P53784 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Sox3P53784 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.08■■□□□ 1.12
Sox3P53784 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sox3P53784 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Sox3P53784 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sox3P53784 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Sox3P53784 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sox3P53784 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sox3P53784 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox3P53784 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox3P53784 Gm11687-201ENSMUST00000118911 886 ntBASIC22.05■■□□□ 1.12
Sox3P53784 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox3P53784 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox3P53784 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sox3P53784 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sox3P53784 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
Sox3P53784 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox3P53784 Gm22567-201ENSMUST00000175542 342 ntBASIC22.04■■□□□ 1.12
Sox3P53784 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox3P53784 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox3P53784 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
Sox3P53784 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.03■■□□□ 1.12
Sox3P53784 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Sox3P53784 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.03■■□□□ 1.12
Sox3P53784 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.03■■□□□ 1.12
Sox3P53784 Gm9806-201ENSMUST00000051080 552 ntBASIC22.03■■□□□ 1.12
Sox3P53784 Gm4799-201ENSMUST00000095396 657 ntBASIC22.03■■□□□ 1.12
Sox3P53784 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox3P53784 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox3P53784 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.02■■□□□ 1.11
Sox3P53784 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox3P53784 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sox3P53784 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox3P53784 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox3P53784 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sox3P53784 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sox3P53784 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sox3P53784 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Sox3P53784 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox3P53784 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Sox3P53784 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox3P53784 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox3P53784 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox3P53784 Gm7332-201ENSMUST00000118351 454 ntBASIC21.98■■□□□ 1.11
Sox3P53784 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.98■■□□□ 1.11
Sox3P53784 Particl-201ENSMUST00000205370 1560 ntBASIC21.98■■□□□ 1.11
Sox3P53784 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox3P53784 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Sox3P53784 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox3P53784 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox3P53784 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox3P53784 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Sox3P53784 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.96■■□□□ 1.11
Sox3P53784 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sox3P53784 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sox3P53784 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox3P53784 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Sox3P53784 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sox3P53784 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sox3P53784 Gm16437-201ENSMUST00000025669 507 ntBASIC21.93■■□□□ 1.1
Sox3P53784 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox3P53784 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox3P53784 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sox3P53784 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox3P53784 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Sox3P53784 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox3P53784 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.91■■□□□ 1.1
Sox3P53784 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Sox3P53784 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.91■■□□□ 1.1
Sox3P53784 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.91■■□□□ 1.1
Sox3P53784 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox3P53784 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox3P53784 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox3P53784 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox3P53784 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Sox3P53784 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.89■■□□□ 1.09
Sox3P53784 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sox3P53784 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sox3P53784 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox3P53784 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Sox3P53784 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sox3P53784 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox3P53784 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox3P53784 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Sox3P53784 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.87■■□□□ 1.09
Sox3P53784 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.87■■□□□ 1.09
Sox3P53784 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox3P53784 Gm5812-201ENSMUST00000061073 957 ntBASIC21.86■■□□□ 1.09
Sox3P53784 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sox3P53784 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms