Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pdx1P52946 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pdx1P52946 Gm7432-201ENSMUST00000210343 879 ntBASIC23.05■■□□□ 1.28
Pdx1P52946 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pdx1P52946 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pdx1P52946 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pdx1P52946 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Pdx1P52946 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pdx1P52946 Gm37136-201ENSMUST00000194368 194 ntBASIC23.04■■□□□ 1.28
Pdx1P52946 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.04■■□□□ 1.28
Pdx1P52946 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Pdx1P52946 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pdx1P52946 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Pdx1P52946 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Pdx1P52946 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pdx1P52946 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pdx1P52946 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.02■■□□□ 1.28
Pdx1P52946 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pdx1P52946 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pdx1P52946 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pdx1P52946 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pdx1P52946 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pdx1P52946 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
Pdx1P52946 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Pdx1P52946 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pdx1P52946 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Pdx1P52946 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pdx1P52946 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.98■■□□□ 1.27
Pdx1P52946 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pdx1P52946 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pdx1P52946 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pdx1P52946 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Pdx1P52946 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pdx1P52946 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pdx1P52946 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Pdx1P52946 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pdx1P52946 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pdx1P52946 Gm11599-201ENSMUST00000118720 878 ntBASIC22.95■■□□□ 1.26
Pdx1P52946 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pdx1P52946 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
Pdx1P52946 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.94■■□□□ 1.26
Pdx1P52946 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pdx1P52946 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pdx1P52946 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.93■■□□□ 1.26
Pdx1P52946 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.93■■□□□ 1.26
Pdx1P52946 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pdx1P52946 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pdx1P52946 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pdx1P52946 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.93■■□□□ 1.26
Pdx1P52946 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pdx1P52946 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pdx1P52946 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pdx1P52946 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pdx1P52946 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pdx1P52946 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pdx1P52946 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pdx1P52946 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pdx1P52946 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pdx1P52946 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pdx1P52946 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Pdx1P52946 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pdx1P52946 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pdx1P52946 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pdx1P52946 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pdx1P52946 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pdx1P52946 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pdx1P52946 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pdx1P52946 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pdx1P52946 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pdx1P52946 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pdx1P52946 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pdx1P52946 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pdx1P52946 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pdx1P52946 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pdx1P52946 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Pdx1P52946 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pdx1P52946 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pdx1P52946 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pdx1P52946 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdx1P52946 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Pdx1P52946 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdx1P52946 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pdx1P52946 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pdx1P52946 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pdx1P52946 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pdx1P52946 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Pdx1P52946 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pdx1P52946 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pdx1P52946 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pdx1P52946 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pdx1P52946 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pdx1P52946 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pdx1P52946 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pdx1P52946 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pdx1P52946 Gm4799-201ENSMUST00000095396 657 ntBASIC22.76■■□□□ 1.23
Pdx1P52946 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pdx1P52946 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Pdx1P52946 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Pdx1P52946 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pdx1P52946 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms