Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Abca1P41233 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Abca1P41233 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Abca1P41233 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abca1P41233 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abca1P41233 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abca1P41233 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abca1P41233 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abca1P41233 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abca1P41233 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.18■□□□□ 0.66
Abca1P41233 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abca1P41233 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abca1P41233 Gm5812-201ENSMUST00000061073 957 ntBASIC19.17■□□□□ 0.66
Abca1P41233 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Abca1P41233 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.16■□□□□ 0.66
Abca1P41233 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abca1P41233 Mir3960-201ENSMUST00000198213 73 ntBASIC19.16■□□□□ 0.66
Abca1P41233 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abca1P41233 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abca1P41233 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abca1P41233 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Abca1P41233 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Abca1P41233 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abca1P41233 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.14■□□□□ 0.65
Abca1P41233 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.13■□□□□ 0.65
Abca1P41233 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abca1P41233 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abca1P41233 Gm27502-201ENSMUST00000183495 199 ntBASIC19.13■□□□□ 0.65
Abca1P41233 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abca1P41233 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abca1P41233 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.12■□□□□ 0.65
Abca1P41233 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Abca1P41233 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Abca1P41233 Gm14523-201ENSMUST00000117260 558 ntBASIC19.11■□□□□ 0.65
Abca1P41233 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Abca1P41233 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Abca1P41233 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abca1P41233 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Abca1P41233 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Abca1P41233 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abca1P41233 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
Abca1P41233 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Abca1P41233 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abca1P41233 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.09■□□□□ 0.65
Abca1P41233 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Abca1P41233 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Abca1P41233 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abca1P41233 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Abca1P41233 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Abca1P41233 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Abca1P41233 Gm15039-201ENSMUST00000118914 875 ntBASIC19.07■□□□□ 0.64
Abca1P41233 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abca1P41233 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Abca1P41233 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Abca1P41233 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Abca1P41233 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abca1P41233 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abca1P41233 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abca1P41233 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abca1P41233 Gm10420-201ENSMUST00000121713 882 ntBASIC19.05■□□□□ 0.64
Abca1P41233 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.05■□□□□ 0.64
Abca1P41233 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Abca1P41233 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.05■□□□□ 0.64
Abca1P41233 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Abca1P41233 Gm37136-201ENSMUST00000194368 194 ntBASIC19.04■□□□□ 0.64
Abca1P41233 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.04■□□□□ 0.64
Abca1P41233 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Abca1P41233 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.04■□□□□ 0.64
Abca1P41233 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Abca1P41233 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.04■□□□□ 0.64
Abca1P41233 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abca1P41233 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.03■□□□□ 0.64
Abca1P41233 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Abca1P41233 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abca1P41233 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Abca1P41233 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Abca1P41233 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.02■□□□□ 0.63
Abca1P41233 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.02■□□□□ 0.63
Abca1P41233 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abca1P41233 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.01■□□□□ 0.63
Abca1P41233 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abca1P41233 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abca1P41233 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abca1P41233 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Abca1P41233 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Abca1P41233 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19■□□□□ 0.63
Abca1P41233 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Abca1P41233 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Abca1P41233 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Abca1P41233 Gm22567-201ENSMUST00000175542 342 ntBASIC18.99■□□□□ 0.63
Abca1P41233 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abca1P41233 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
Abca1P41233 Gm5921-201ENSMUST00000075898 882 ntBASIC18.99■□□□□ 0.63
Abca1P41233 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Abca1P41233 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Abca1P41233 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Abca1P41233 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Abca1P41233 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Abca1P41233 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.97■□□□□ 0.63
Abca1P41233 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms