Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf1aP25118 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tnfrsf1aP25118 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf1aP25118 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf1aP25118 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.37■□□□□ 0.69
Tnfrsf1aP25118 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf1aP25118 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf1aP25118 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.37■□□□□ 0.69
Tnfrsf1aP25118 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Tnfrsf1aP25118 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf1aP25118 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf1aP25118 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf1aP25118 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf1aP25118 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Tnfrsf1aP25118 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Tnfrsf1aP25118 Nkain2-201ENSMUST00000092602 558 ntBASIC19.34■□□□□ 0.69
Tnfrsf1aP25118 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf1aP25118 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf1aP25118 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf1aP25118 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 Particl-201ENSMUST00000205370 1560 ntBASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Tnfrsf1aP25118 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf1aP25118 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Tnfrsf1aP25118 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf1aP25118 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf1aP25118 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf1aP25118 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Tnfrsf1aP25118 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf1aP25118 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf1aP25118 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Tnfrsf1aP25118 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf1aP25118 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnfrsf1aP25118 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf1aP25118 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf1aP25118 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf1aP25118 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf1aP25118 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf1aP25118 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf1aP25118 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.27■□□□□ 0.68
Tnfrsf1aP25118 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Tnfrsf1aP25118 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf1aP25118 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.26■□□□□ 0.67
Tnfrsf1aP25118 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf1aP25118 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf1aP25118 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf1aP25118 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf1aP25118 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf1aP25118 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.23■□□□□ 0.67
Tnfrsf1aP25118 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf1aP25118 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf1aP25118 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf1aP25118 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.22■□□□□ 0.67
Tnfrsf1aP25118 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.22■□□□□ 0.67
Tnfrsf1aP25118 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.22■□□□□ 0.67
Tnfrsf1aP25118 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf1aP25118 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Tnfrsf1aP25118 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf1aP25118 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf1aP25118 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1aP25118 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Tnfrsf1aP25118 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1aP25118 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1aP25118 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1aP25118 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1aP25118 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1aP25118 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1aP25118 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1aP25118 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tnfrsf1aP25118 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf1aP25118 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1aP25118 Gm6821-201ENSMUST00000107540 542 ntBASIC19.16■□□□□ 0.66
Tnfrsf1aP25118 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.16■□□□□ 0.66
Tnfrsf1aP25118 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms