Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01800 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01800 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
P01800 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P01800 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
P01800 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
P01800 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.28■□□□□ 0.84
P01800 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
P01800 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
P01800 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
P01800 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P01800 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.26■□□□□ 0.83
P01800 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.26■□□□□ 0.83
P01800 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01800 Gm30023-201ENSMUST00000197970 889 ntBASIC20.26■□□□□ 0.83
P01800 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P01800 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01800 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01800 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.25■□□□□ 0.83
P01800 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01800 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
P01800 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.25■□□□□ 0.83
P01800 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01800 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P01800 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P01800 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P01800 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
P01800 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P01800 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
P01800 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P01800 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P01800 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01800 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
P01800 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
P01800 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01800 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01800 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01800 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
P01800 Particl-201ENSMUST00000205370 1560 ntBASIC20.21■□□□□ 0.83
P01800 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01800 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01800 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01800 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01800 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01800 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01800 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.19■□□□□ 0.82
P01800 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01800 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01800 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01800 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01800 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01800 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01800 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.18■□□□□ 0.82
P01800 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01800 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01800 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
P01800 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
P01800 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01800 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
P01800 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01800 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
P01800 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01800 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P01800 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01800 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
P01800 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01800 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01800 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01800 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01800 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
P01800 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01800 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.11■□□□□ 0.81
P01800 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
P01800 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.11■□□□□ 0.81
P01800 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01800 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P01800 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01800 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01800 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01800 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01800 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01800 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01800 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.08■□□□□ 0.8
P01800 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
P01800 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
P01800 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01800 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.06■□□□□ 0.8
P01800 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01800 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
P01800 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.05■□□□□ 0.8
P01800 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P01800 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01800 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01800 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P01800 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P01800 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01800 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01800 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.03■□□□□ 0.8
P01800 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01800 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms