Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Sema3fO88632 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Sema3fO88632 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.2■■□□□ 1.94
Sema3fO88632 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Sema3fO88632 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Sema3fO88632 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Sema3fO88632 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Sema3fO88632 Cap2-205ENSMUST00000225824 1634 ntBASIC27.19■■□□□ 1.94
Sema3fO88632 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Sema3fO88632 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Sema3fO88632 Mir3960-201ENSMUST00000198213 73 ntBASIC27.18■■□□□ 1.94
Sema3fO88632 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Sema3fO88632 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.17■■□□□ 1.94
Sema3fO88632 Scarna2-201ENSMUST00000157560 414 ntBASIC27.16■■□□□ 1.94
Sema3fO88632 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Sema3fO88632 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Sema3fO88632 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.15■■□□□ 1.94
Sema3fO88632 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.15■■□□□ 1.94
Sema3fO88632 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Sema3fO88632 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Sema3fO88632 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.13■■□□□ 1.93
Sema3fO88632 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Sema3fO88632 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.13■■□□□ 1.93
Sema3fO88632 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Sema3fO88632 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Sema3fO88632 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Sema3fO88632 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.09■■□□□ 1.93
Sema3fO88632 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sema3fO88632 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.09■■□□□ 1.93
Sema3fO88632 Gm9806-201ENSMUST00000051080 552 ntBASIC27.08■■□□□ 1.93
Sema3fO88632 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Sema3fO88632 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Sema3fO88632 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Sema3fO88632 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.06■■□□□ 1.92
Sema3fO88632 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Sema3fO88632 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Sema3fO88632 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Sema3fO88632 Gm16437-201ENSMUST00000025669 507 ntBASIC27.04■■□□□ 1.92
Sema3fO88632 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.03■■□□□ 1.92
Sema3fO88632 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Sema3fO88632 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Sema3fO88632 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.02■■□□□ 1.92
Sema3fO88632 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.02■■□□□ 1.92
Sema3fO88632 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Sema3fO88632 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Sema3fO88632 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27■■□□□ 1.91
Sema3fO88632 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27■■□□□ 1.91
Sema3fO88632 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27■■□□□ 1.91
Sema3fO88632 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27■■□□□ 1.91
Sema3fO88632 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27■■□□□ 1.91
Sema3fO88632 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27■■□□□ 1.91
Sema3fO88632 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Sema3fO88632 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Sema3fO88632 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
Sema3fO88632 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27■■□□□ 1.91
Sema3fO88632 Gm11687-201ENSMUST00000118911 886 ntBASIC26.99■■□□□ 1.91
Sema3fO88632 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.99■■□□□ 1.91
Sema3fO88632 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.99■■□□□ 1.91
Sema3fO88632 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Sema3fO88632 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Sema3fO88632 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Sema3fO88632 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.97■■□□□ 1.91
Sema3fO88632 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Sema3fO88632 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Sema3fO88632 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Sema3fO88632 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.94■■□□□ 1.9
Sema3fO88632 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Sema3fO88632 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.93■■□□□ 1.9
Sema3fO88632 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Sema3fO88632 Gm9812-201ENSMUST00000061934 968 ntBASIC26.93■■□□□ 1.9
Sema3fO88632 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Sema3fO88632 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Sema3fO88632 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Sema3fO88632 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Sema3fO88632 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.92■■□□□ 1.9
Sema3fO88632 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Sema3fO88632 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Sema3fO88632 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Sema3fO88632 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Sema3fO88632 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Sema3fO88632 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.89■■□□□ 1.9
Sema3fO88632 Gm12366-201ENSMUST00000121722 873 ntBASIC26.89■■□□□ 1.9
Sema3fO88632 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.89■■□□□ 1.9
Sema3fO88632 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.89■■□□□ 1.9
Sema3fO88632 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Sema3fO88632 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.89■■□□□ 1.9
Sema3fO88632 Gm5786-201ENSMUST00000085368 882 ntBASIC26.89■■□□□ 1.9
Sema3fO88632 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Sema3fO88632 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Sema3fO88632 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Sema3fO88632 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.87■■□□□ 1.89
Sema3fO88632 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Sema3fO88632 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Sema3fO88632 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Sema3fO88632 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Sema3fO88632 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.86■■□□□ 1.89
Sema3fO88632 Gm27502-201ENSMUST00000183495 199 ntBASIC26.86■■□□□ 1.89
Sema3fO88632 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Sema3fO88632 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Sema3fO88632 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms