Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ubr1O70481 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.37■■■□□ 2.61
Ubr1O70481 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ubr1O70481 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ubr1O70481 AC151971.4-201ENSMUST00000214717 704 ntBASIC31.35■■■□□ 2.61
Ubr1O70481 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Ubr1O70481 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Ubr1O70481 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ubr1O70481 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.34■■■□□ 2.61
Ubr1O70481 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ubr1O70481 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Ubr1O70481 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ubr1O70481 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC31.31■■■□□ 2.6
Ubr1O70481 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC31.31■■■□□ 2.6
Ubr1O70481 Gm14121-201ENSMUST00000121441 1380 ntBASIC31.31■■■□□ 2.6
Ubr1O70481 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ubr1O70481 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ubr1O70481 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ubr1O70481 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ubr1O70481 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Ubr1O70481 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC31.28■■■□□ 2.6
Ubr1O70481 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.28■■■□□ 2.6
Ubr1O70481 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ubr1O70481 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC31.27■■■□□ 2.6
Ubr1O70481 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Ubr1O70481 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Ubr1O70481 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Ubr1O70481 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ubr1O70481 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC31.25■■■□□ 2.59
Ubr1O70481 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ubr1O70481 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ubr1O70481 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ubr1O70481 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC31.24■■■□□ 2.59
Ubr1O70481 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ubr1O70481 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC31.22■■■□□ 2.59
Ubr1O70481 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Ubr1O70481 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC31.22■■■□□ 2.59
Ubr1O70481 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ubr1O70481 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31.21■■■□□ 2.59
Ubr1O70481 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Ubr1O70481 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
Ubr1O70481 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC31.2■■■□□ 2.58
Ubr1O70481 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Ubr1O70481 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ubr1O70481 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
Ubr1O70481 Gm9910-201ENSMUST00000195385 1550 ntBASIC31.17■■■□□ 2.58
Ubr1O70481 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
Ubr1O70481 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ubr1O70481 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC31.16■■■□□ 2.58
Ubr1O70481 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ubr1O70481 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ubr1O70481 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ubr1O70481 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Ubr1O70481 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ubr1O70481 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ubr1O70481 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ubr1O70481 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ubr1O70481 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
Ubr1O70481 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ubr1O70481 Gm9812-201ENSMUST00000061934 968 ntBASIC31.14■■■□□ 2.58
Ubr1O70481 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ubr1O70481 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Ubr1O70481 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ubr1O70481 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ubr1O70481 Gm7332-201ENSMUST00000118351 454 ntBASIC31.12■■■□□ 2.57
Ubr1O70481 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Ubr1O70481 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ubr1O70481 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ubr1O70481 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC31.1■■■□□ 2.57
Ubr1O70481 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Ubr1O70481 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ubr1O70481 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ubr1O70481 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
Ubr1O70481 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ubr1O70481 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ubr1O70481 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ubr1O70481 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Ubr1O70481 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Ubr1O70481 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ubr1O70481 Gm14523-201ENSMUST00000117260 558 ntBASIC31.06■■■□□ 2.56
Ubr1O70481 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ubr1O70481 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ubr1O70481 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Ubr1O70481 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ubr1O70481 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ubr1O70481 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ubr1O70481 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ubr1O70481 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ubr1O70481 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ubr1O70481 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC31.02■■■□□ 2.56
Ubr1O70481 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Ubr1O70481 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ubr1O70481 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
Ubr1O70481 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC30.99■■■□□ 2.55
Ubr1O70481 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Ubr1O70481 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ubr1O70481 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC30.97■■■□□ 2.55
Ubr1O70481 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ubr1O70481 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC30.97■■■□□ 2.55
Ubr1O70481 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms