Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
Ptch2O35595 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ptch2O35595 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ptch2O35595 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
Ptch2O35595 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.95■■□□□ 1.42
Ptch2O35595 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.95■■□□□ 1.42
Ptch2O35595 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ptch2O35595 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ptch2O35595 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ptch2O35595 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ptch2O35595 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Ptch2O35595 Amer2-203ENSMUST00000225247 2662 ntBASIC23.94■■□□□ 1.42
Ptch2O35595 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.94■■□□□ 1.42
Ptch2O35595 Gm12366-201ENSMUST00000121722 873 ntBASIC23.94■■□□□ 1.42
Ptch2O35595 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.94■■□□□ 1.42
Ptch2O35595 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.94■■□□□ 1.42
Ptch2O35595 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ptch2O35595 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.94■■□□□ 1.42
Ptch2O35595 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.94■■□□□ 1.42
Ptch2O35595 Gm5786-201ENSMUST00000085368 882 ntBASIC23.94■■□□□ 1.42
Ptch2O35595 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ptch2O35595 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ptch2O35595 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ptch2O35595 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Ptch2O35595 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.92■■□□□ 1.42
Ptch2O35595 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ptch2O35595 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ptch2O35595 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ptch2O35595 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.91■■□□□ 1.42
Ptch2O35595 Gm27502-201ENSMUST00000183495 199 ntBASIC23.91■■□□□ 1.42
Ptch2O35595 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.91■■□□□ 1.42
Ptch2O35595 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ptch2O35595 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ptch2O35595 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ptch2O35595 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ptch2O35595 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ptch2O35595 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ptch2O35595 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.88■■□□□ 1.41
Ptch2O35595 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ptch2O35595 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Ptch2O35595 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.87■■□□□ 1.41
Ptch2O35595 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ptch2O35595 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.86■■□□□ 1.41
Ptch2O35595 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ptch2O35595 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ptch2O35595 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.86■■□□□ 1.41
Ptch2O35595 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ptch2O35595 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.85■■□□□ 1.41
Ptch2O35595 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ptch2O35595 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch2O35595 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch2O35595 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ptch2O35595 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.83■■□□□ 1.41
Ptch2O35595 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Ptch2O35595 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptch2O35595 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ptch2O35595 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ptch2O35595 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptch2O35595 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptch2O35595 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptch2O35595 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptch2O35595 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptch2O35595 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.8■■□□□ 1.4
Ptch2O35595 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptch2O35595 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptch2O35595 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.8■■□□□ 1.4
Ptch2O35595 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptch2O35595 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ptch2O35595 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptch2O35595 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.79■■□□□ 1.4
Ptch2O35595 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptch2O35595 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptch2O35595 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptch2O35595 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptch2O35595 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptch2O35595 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptch2O35595 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptch2O35595 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptch2O35595 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ptch2O35595 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.75■■□□□ 1.39
Ptch2O35595 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ptch2O35595 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ptch2O35595 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ptch2O35595 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.74■■□□□ 1.39
Ptch2O35595 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Ptch2O35595 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch2O35595 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch2O35595 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.73■■□□□ 1.39
Ptch2O35595 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch2O35595 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptch2O35595 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptch2O35595 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ptch2O35595 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptch2O35595 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptch2O35595 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptch2O35595 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
Ptch2O35595 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptch2O35595 Gm9812-201ENSMUST00000061934 968 ntBASIC23.71■■□□□ 1.39
Ptch2O35595 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Ptch2O35595 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms