Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.32■■□□□ 1
Capn1O35350 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Capn1O35350 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.32■■□□□ 1
Capn1O35350 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Capn1O35350 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Capn1O35350 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Capn1O35350 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Capn1O35350 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Capn1O35350 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Capn1O35350 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Capn1O35350 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Capn1O35350 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.28■■□□□ 1
Capn1O35350 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.28■■□□□ 1
Capn1O35350 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.27■■□□□ 1
Capn1O35350 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Capn1O35350 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.26■□□□□ 0.99
Capn1O35350 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Capn1O35350 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Capn1O35350 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Capn1O35350 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Capn1O35350 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Capn1O35350 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Capn1O35350 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Capn1O35350 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Capn1O35350 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Capn1O35350 Cap2-205ENSMUST00000225824 1634 ntBASIC21.23■□□□□ 0.99
Capn1O35350 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Capn1O35350 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.23■□□□□ 0.99
Capn1O35350 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Capn1O35350 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Capn1O35350 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Capn1O35350 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Capn1O35350 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Capn1O35350 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Capn1O35350 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Capn1O35350 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Capn1O35350 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Capn1O35350 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Capn1O35350 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Capn1O35350 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Capn1O35350 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Capn1O35350 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Capn1O35350 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Capn1O35350 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Capn1O35350 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.19■□□□□ 0.98
Capn1O35350 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Capn1O35350 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Capn1O35350 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Capn1O35350 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Capn1O35350 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Capn1O35350 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.18■□□□□ 0.98
Capn1O35350 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Capn1O35350 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Capn1O35350 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Capn1O35350 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Capn1O35350 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.16■□□□□ 0.98
Capn1O35350 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Capn1O35350 Gm37136-201ENSMUST00000194368 194 ntBASIC21.16■□□□□ 0.98
Capn1O35350 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Capn1O35350 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Capn1O35350 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.15■□□□□ 0.98
Capn1O35350 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Capn1O35350 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.15■□□□□ 0.98
Capn1O35350 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Capn1O35350 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
Capn1O35350 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.97
Capn1O35350 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Capn1O35350 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.13■□□□□ 0.97
Capn1O35350 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Capn1O35350 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Capn1O35350 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Capn1O35350 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Capn1O35350 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Capn1O35350 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Capn1O35350 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Capn1O35350 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.12■□□□□ 0.97
Capn1O35350 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Capn1O35350 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Capn1O35350 Gm4799-201ENSMUST00000095396 657 ntBASIC21.12■□□□□ 0.97
Capn1O35350 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Capn1O35350 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Capn1O35350 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.11■□□□□ 0.97
Capn1O35350 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Capn1O35350 Scarna2-201ENSMUST00000157560 414 ntBASIC21.1■□□□□ 0.97
Capn1O35350 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Capn1O35350 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Capn1O35350 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Capn1O35350 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Capn1O35350 Mir3960-201ENSMUST00000198213 73 ntBASIC21.09■□□□□ 0.97
Capn1O35350 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Capn1O35350 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Capn1O35350 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Capn1O35350 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Capn1O35350 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Capn1O35350 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Capn1O35350 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.08■□□□□ 0.97
Capn1O35350 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Capn1O35350 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.08■□□□□ 0.97
Capn1O35350 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Capn1O35350 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms