Protein–RNA interactions for Protein: O35089

Cnih2, Protein cornichon homolog 2, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih2O35089 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cnih2O35089 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cnih2O35089 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cnih2O35089 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cnih2O35089 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cnih2O35089 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cnih2O35089 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cnih2O35089 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cnih2O35089 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cnih2O35089 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Cnih2O35089 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cnih2O35089 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cnih2O35089 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cnih2O35089 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cnih2O35089 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cnih2O35089 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnih2O35089 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnih2O35089 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnih2O35089 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnih2O35089 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cnih2O35089 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnih2O35089 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnih2O35089 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cnih2O35089 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cnih2O35089 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cnih2O35089 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cnih2O35089 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cnih2O35089 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cnih2O35089 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cnih2O35089 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cnih2O35089 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.46■□□□□ 0.87
Cnih2O35089 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Cnih2O35089 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnih2O35089 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.45■□□□□ 0.86
Cnih2O35089 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnih2O35089 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.45■□□□□ 0.86
Cnih2O35089 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.45■□□□□ 0.86
Cnih2O35089 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cnih2O35089 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnih2O35089 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.43■□□□□ 0.86
Cnih2O35089 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnih2O35089 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cnih2O35089 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnih2O35089 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cnih2O35089 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnih2O35089 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnih2O35089 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnih2O35089 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnih2O35089 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnih2O35089 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnih2O35089 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cnih2O35089 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnih2O35089 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cnih2O35089 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Cnih2O35089 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cnih2O35089 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.4■□□□□ 0.86
Cnih2O35089 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cnih2O35089 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cnih2O35089 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cnih2O35089 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cnih2O35089 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnih2O35089 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cnih2O35089 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cnih2O35089 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cnih2O35089 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnih2O35089 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cnih2O35089 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnih2O35089 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cnih2O35089 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnih2O35089 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.36■□□□□ 0.85
Cnih2O35089 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cnih2O35089 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnih2O35089 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnih2O35089 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cnih2O35089 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cnih2O35089 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnih2O35089 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cnih2O35089 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnih2O35089 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cnih2O35089 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cnih2O35089 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cnih2O35089 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cnih2O35089 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnih2O35089 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnih2O35089 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnih2O35089 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cnih2O35089 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cnih2O35089 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnih2O35089 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.31■□□□□ 0.84
Cnih2O35089 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cnih2O35089 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Cnih2O35089 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.31■□□□□ 0.84
Cnih2O35089 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.3■□□□□ 0.84
Cnih2O35089 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cnih2O35089 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cnih2O35089 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnih2O35089 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnih2O35089 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Cnih2O35089 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnih2O35089 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms