Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.17■■□□□ 1.46
Ebf3O08791 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ebf3O08791 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ebf3O08791 Gm11687-201ENSMUST00000118911 886 ntBASIC24.16■■□□□ 1.46
Ebf3O08791 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ebf3O08791 Gm9806-201ENSMUST00000051080 552 ntBASIC24.16■■□□□ 1.46
Ebf3O08791 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.15■■□□□ 1.46
Ebf3O08791 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ebf3O08791 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.15■■□□□ 1.46
Ebf3O08791 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ebf3O08791 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ebf3O08791 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ebf3O08791 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Ebf3O08791 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ebf3O08791 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.13■■□□□ 1.45
Ebf3O08791 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.13■■□□□ 1.45
Ebf3O08791 Gm16437-201ENSMUST00000025669 507 ntBASIC24.13■■□□□ 1.45
Ebf3O08791 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ebf3O08791 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ebf3O08791 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.11■■□□□ 1.45
Ebf3O08791 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ebf3O08791 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ebf3O08791 Mir3960-201ENSMUST00000198213 73 ntBASIC24.1■■□□□ 1.45
Ebf3O08791 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.1■■□□□ 1.45
Ebf3O08791 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ebf3O08791 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ebf3O08791 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ebf3O08791 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.08■■□□□ 1.45
Ebf3O08791 Gm37136-201ENSMUST00000194368 194 ntBASIC24.08■■□□□ 1.45
Ebf3O08791 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ebf3O08791 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ebf3O08791 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ebf3O08791 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.07■■□□□ 1.44
Ebf3O08791 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.06■■□□□ 1.44
Ebf3O08791 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ebf3O08791 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ebf3O08791 Gm45364-201ENSMUST00000210883 159 ntBASIC24.06■■□□□ 1.44
Ebf3O08791 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ebf3O08791 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ebf3O08791 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ebf3O08791 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ebf3O08791 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ebf3O08791 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.05■■□□□ 1.44
Ebf3O08791 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.05■■□□□ 1.44
Ebf3O08791 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ebf3O08791 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Ebf3O08791 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ebf3O08791 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.04■■□□□ 1.44
Ebf3O08791 Gm12366-201ENSMUST00000121722 873 ntBASIC24.04■■□□□ 1.44
Ebf3O08791 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.04■■□□□ 1.44
Ebf3O08791 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.04■■□□□ 1.44
Ebf3O08791 Gm5786-201ENSMUST00000085368 882 ntBASIC24.04■■□□□ 1.44
Ebf3O08791 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ebf3O08791 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ebf3O08791 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ebf3O08791 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ebf3O08791 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ebf3O08791 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Ebf3O08791 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ebf3O08791 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ebf3O08791 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ebf3O08791 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ebf3O08791 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ebf3O08791 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ebf3O08791 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ebf3O08791 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
Ebf3O08791 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.99■■□□□ 1.43
Ebf3O08791 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ebf3O08791 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.99■■□□□ 1.43
Ebf3O08791 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ebf3O08791 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Ebf3O08791 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Ebf3O08791 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ebf3O08791 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ebf3O08791 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.95■■□□□ 1.42
Ebf3O08791 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Ebf3O08791 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ebf3O08791 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.95■■□□□ 1.42
Ebf3O08791 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ebf3O08791 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ebf3O08791 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.94■■□□□ 1.42
Ebf3O08791 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Ebf3O08791 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ebf3O08791 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ebf3O08791 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ebf3O08791 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ebf3O08791 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ebf3O08791 Gm27502-201ENSMUST00000183495 199 ntBASIC23.92■■□□□ 1.42
Ebf3O08791 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ebf3O08791 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ebf3O08791 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ebf3O08791 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ebf3O08791 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ebf3O08791 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ebf3O08791 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ebf3O08791 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
Ebf3O08791 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ebf3O08791 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ebf3O08791 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.89■■□□□ 1.42
Ebf3O08791 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.89■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms