Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Herc1E9PZP8 Gm37847-201ENSMUST00000192163 1497 ntBASIC13.96□□□□□ -0.17
Herc1E9PZP8 Gm31748-201ENSMUST00000194938 1497 ntBASIC13.96□□□□□ -0.17
Herc1E9PZP8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Herc1E9PZP8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Herc1E9PZP8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC13.95□□□□□ -0.18
Herc1E9PZP8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC13.95□□□□□ -0.18
Herc1E9PZP8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Herc1E9PZP8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Herc1E9PZP8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Herc1E9PZP8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.94□□□□□ -0.18
Herc1E9PZP8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Herc1E9PZP8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Herc1E9PZP8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Herc1E9PZP8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Herc1E9PZP8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Herc1E9PZP8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Herc1E9PZP8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Herc1E9PZP8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Herc1E9PZP8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Herc1E9PZP8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.91□□□□□ -0.18
Herc1E9PZP8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Herc1E9PZP8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Herc1E9PZP8 Gm21956-201ENSMUST00000179946 522 ntBASIC13.9□□□□□ -0.18
Herc1E9PZP8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC13.9□□□□□ -0.18
Herc1E9PZP8 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.89□□□□□ -0.19
Herc1E9PZP8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Herc1E9PZP8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Herc1E9PZP8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Herc1E9PZP8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Herc1E9PZP8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Herc1E9PZP8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Herc1E9PZP8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Herc1E9PZP8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Herc1E9PZP8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
Herc1E9PZP8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Herc1E9PZP8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Herc1E9PZP8 Etf1-202ENSMUST00000180351 108 ntBASIC13.88□□□□□ -0.19
Herc1E9PZP8 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.88□□□□□ -0.19
Herc1E9PZP8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Herc1E9PZP8 Mir3960-201ENSMUST00000198213 73 ntBASIC13.87□□□□□ -0.19
Herc1E9PZP8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.87□□□□□ -0.19
Herc1E9PZP8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.87□□□□□ -0.19
Herc1E9PZP8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Herc1E9PZP8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.86□□□□□ -0.19
Herc1E9PZP8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Herc1E9PZP8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Herc1E9PZP8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Herc1E9PZP8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Herc1E9PZP8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Herc1E9PZP8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Herc1E9PZP8 Gm13241-201ENSMUST00000094493 780 ntBASIC13.86□□□□□ -0.19
Herc1E9PZP8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Herc1E9PZP8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.85□□□□□ -0.19
Herc1E9PZP8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Herc1E9PZP8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Herc1E9PZP8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Herc1E9PZP8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Herc1E9PZP8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC13.84□□□□□ -0.19
Herc1E9PZP8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC13.84□□□□□ -0.19
Herc1E9PZP8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.84□□□□□ -0.19
Herc1E9PZP8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.84□□□□□ -0.19
Herc1E9PZP8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Herc1E9PZP8 Gm12818-201ENSMUST00000117562 1349 ntBASIC13.84□□□□□ -0.19
Herc1E9PZP8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC13.84□□□□□ -0.19
Herc1E9PZP8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Herc1E9PZP8 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.83□□□□□ -0.2
Herc1E9PZP8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Herc1E9PZP8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Herc1E9PZP8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.83□□□□□ -0.2
Herc1E9PZP8 Gm8495-201ENSMUST00000188740 694 ntBASIC13.82□□□□□ -0.2
Herc1E9PZP8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Herc1E9PZP8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Herc1E9PZP8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Herc1E9PZP8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Herc1E9PZP8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Herc1E9PZP8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Herc1E9PZP8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Herc1E9PZP8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC13.81□□□□□ -0.2
Herc1E9PZP8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Herc1E9PZP8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Herc1E9PZP8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Herc1E9PZP8 Gm43566-201ENSMUST00000196851 808 ntBASIC13.81□□□□□ -0.2
Herc1E9PZP8 Gm13889-201ENSMUST00000099689 1386 ntBASIC13.81□□□□□ -0.2
Herc1E9PZP8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Herc1E9PZP8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Herc1E9PZP8 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.8□□□□□ -0.2
Herc1E9PZP8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.8□□□□□ -0.2
Herc1E9PZP8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Herc1E9PZP8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Herc1E9PZP8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.8□□□□□ -0.2
Herc1E9PZP8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Herc1E9PZP8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Herc1E9PZP8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Herc1E9PZP8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Herc1E9PZP8 Gm9910-201ENSMUST00000195385 1550 ntBASIC13.78□□□□□ -0.2
Herc1E9PZP8 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.78□□□□□ -0.2
Herc1E9PZP8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.77□□□□□ -0.21
Herc1E9PZP8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Herc1E9PZP8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms