Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
BC035044E0CXF8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BC035044E0CXF8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BC035044E0CXF8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BC035044E0CXF8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BC035044E0CXF8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BC035044E0CXF8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.87■□□□□ 0.77
BC035044E0CXF8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BC035044E0CXF8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
BC035044E0CXF8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.86■□□□□ 0.77
BC035044E0CXF8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
BC035044E0CXF8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BC035044E0CXF8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.86■□□□□ 0.77
BC035044E0CXF8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
BC035044E0CXF8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
BC035044E0CXF8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BC035044E0CXF8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
BC035044E0CXF8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.84■□□□□ 0.77
BC035044E0CXF8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BC035044E0CXF8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BC035044E0CXF8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
BC035044E0CXF8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BC035044E0CXF8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.81■□□□□ 0.76
BC035044E0CXF8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.81■□□□□ 0.76
BC035044E0CXF8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BC035044E0CXF8 Particl-201ENSMUST00000205370 1560 ntBASIC19.8■□□□□ 0.76
BC035044E0CXF8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
BC035044E0CXF8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
BC035044E0CXF8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
BC035044E0CXF8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BC035044E0CXF8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BC035044E0CXF8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BC035044E0CXF8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BC035044E0CXF8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
BC035044E0CXF8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BC035044E0CXF8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
BC035044E0CXF8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BC035044E0CXF8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BC035044E0CXF8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BC035044E0CXF8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BC035044E0CXF8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
BC035044E0CXF8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
BC035044E0CXF8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BC035044E0CXF8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BC035044E0CXF8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BC035044E0CXF8 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.76■□□□□ 0.75
BC035044E0CXF8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BC035044E0CXF8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BC035044E0CXF8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BC035044E0CXF8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BC035044E0CXF8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
BC035044E0CXF8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.74■□□□□ 0.75
BC035044E0CXF8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.74■□□□□ 0.75
BC035044E0CXF8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BC035044E0CXF8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BC035044E0CXF8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BC035044E0CXF8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BC035044E0CXF8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BC035044E0CXF8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BC035044E0CXF8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
BC035044E0CXF8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BC035044E0CXF8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BC035044E0CXF8 Gm45855-201ENSMUST00000212546 880 ntBASIC19.72■□□□□ 0.75
BC035044E0CXF8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
BC035044E0CXF8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BC035044E0CXF8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BC035044E0CXF8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BC035044E0CXF8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BC035044E0CXF8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
BC035044E0CXF8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
BC035044E0CXF8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BC035044E0CXF8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
BC035044E0CXF8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.69■□□□□ 0.74
BC035044E0CXF8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BC035044E0CXF8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
BC035044E0CXF8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
BC035044E0CXF8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
BC035044E0CXF8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BC035044E0CXF8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BC035044E0CXF8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BC035044E0CXF8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BC035044E0CXF8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
BC035044E0CXF8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BC035044E0CXF8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
BC035044E0CXF8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BC035044E0CXF8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BC035044E0CXF8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BC035044E0CXF8 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.67■□□□□ 0.74
BC035044E0CXF8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BC035044E0CXF8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
BC035044E0CXF8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BC035044E0CXF8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BC035044E0CXF8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BC035044E0CXF8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BC035044E0CXF8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BC035044E0CXF8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BC035044E0CXF8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BC035044E0CXF8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BC035044E0CXF8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BC035044E0CXF8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms